Sphingobium phenoxybenzoativorans: KFK14_06560
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Entry
KFK14_06560 CDS
T07582
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
spph
Sphingobium phenoxybenzoativorans
Pathway
spph03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KFK14_06560 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spph03400
]
KFK14_06560 (ruvB)
Enzymes [BR:
spph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KFK14_06560 (ruvB)
DNA repair and recombination proteins [BR:
spph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KFK14_06560 (ruvB)
RecFOR pathway proteins
KFK14_06560 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_3
AAA_16
Sigma54_activat
nSTAND3
Rad17
AAA_18
AAA_22
AAA_17
TsaE
Bac_DnaA
AAA_14
RNA_helicase
AAA_28
NB-ARC
AAA_33
ABC_tran
NACHT
AAA_24
DUF815
IstB_IS21
Parvo_NS1
AAA_PrkA
Motif
Other DBs
NCBI-ProteinID:
QUT07080
UniProt:
A0A975K940
LinkDB
All DBs
Position
complement(1355235..1356257)
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AA seq
340 aa
AA seq
DB search
MTDTDRLITPARRAEDADAALRPKSLDEFIGQQAARENLRIFIQAAKQRGEALDHVLFFG
PPGLGKTTLAQIVAKEMGVGFRATSGPVIAKSGDLAALLTNLDEGDVLFVDEIHRLNPAV
EEILYPAMEDRALDLMIGEGPSARSVRIDLPNFTLVGATTRQGLLTTPLRDRFGIPVRLQ
FYTVPELELVVRRAAGLLGLAVTPEGSTEIARRSRGTPRIAGRLLRRVRDFANVANAGQV
DAKVADAALNRLEVDHLGLDLMDRRYLTMIADVYRGGPVGVETLAAGLSEPRDTVEEVIE
PYLIQLGLIARTARGRCLNGPGWKHLGLTPPEGSQDGLFD
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgacactgaccgcctcatcacgcccgcccgtcgcgccgaggatgctgacgccgcg
ctgcggcccaagtcgcttgacgagttcatcgggcagcaggcggcgcgcgagaatctgcgc
atcttcatccaggcggcgaagcagcggggcgaggcgctagatcatgtgctgttcttcggc
ccgcccggccttggcaagaccaccctcgcccagatcgtcgccaaggagatgggcgtaggt
ttccgcgccacatccggccccgtcatcgccaagtccggcgatcttgccgcgctcctcacc
aatctggatgagggcgacgtgctgtttgtggatgaaatccaccgcctgaaccctgccgtc
gaggaaatcctctacccggcgatggaggaccgtgcgctcgacctgatgataggtgaaggc
ccctctgcccgatcggtccgcatcgacctgcccaatttcacgctggtcggcgcgacgacg
cggcaagggttgctgaccacgccgctgcgcgaccgtttcggcattcccgtgcgcctgcaa
ttctacacggtgccggaactggaactggtcgtgcgccgcgccgccgggctgcttggcctt
gccgtcacgccggagggatcgaccgagatcgcccgccggtctcgcgggacgccgcgcatt
gccggacggctgctgcgccgggtgcgcgatttcgccaatgtcgccaatgcggggcaagtc
gatgcgaaggtcgccgacgccgcgctgaaccggctggaggtcgaccatctgggcctcgac
ctgatggacaggcgctatctcaccatgatcgcggacgtttatcgcggcggccccgtgggc
gtggagacgctggccgctggtctttccgaaccgcgcgacacggttgaggaagtgatcgaa
ccctatctgatccagttgggcctcatcgcccgcaccgcgcgggggcgctgcctcaacggt
cctggctggaagcatctgggcctcaccccgcccgaagggtcgcaggacgggctgttcgat
taa
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