Sphingobium phenoxybenzoativorans: KFK14_08740
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Entry
KFK14_08740 CDS
T07582
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
spph
Sphingobium phenoxybenzoativorans
Brite
KEGG Orthology (KO) [BR:
spph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spph03016
]
KFK14_08740 (rnd)
Enzymes [BR:
spph01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
KFK14_08740 (rnd)
Transfer RNA biogenesis [BR:
spph03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
KFK14_08740 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QUT07462
UniProt:
A0A975KC99
LinkDB
All DBs
Position
complement(1811561..1812751)
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AA seq
396 aa
AA seq
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MQIHPLITDSKTLAEFCARIAKSPYIAVDTEFMRENSYWPELCLVQVADANEAAAIDPKA
PGLDMGPLLDLLVDNEDVLKVFHAGGQDIEIVHNLTGKTPHPMFDTQIAAMALGLGEQIG
YGNLVEAWLGITLDKGARFTDWARRPLDKRQIDYAIGDVTYLIQMFPVMLEKLRSTGRGD
WLDQEMERISDPENYINRPGDAWKRVRISSRKPDVLGRLKALAAWREQEAQDKNLPRGRI
VKDETLADIASHPPRSQDDLGKVRGLSAAWRGNDIGARMMAALAGHAPLSKDELPERDPK
KPALGKDGALVADLLKLLLKIRSRDINVAARLLARSDDLDALAAGVRDNLPILEGWRYEQ
FGRDAVDLVEGRMAFAVRNGRLRMTRTAVDGTEAKA
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattcatccgctgattaccgacagcaagacactcgccgaattctgcgcccgcatc
gccaagagcccctatatcgccgtggacacggagttcatgcgcgaaaacagctactggccg
gagctttgcctggtgcaggtcgccgacgccaatgaggccgccgcgatcgacccaaaggcg
ccggggctggacatggggccgctgctcgacctgctggtcgataatgaggatgtgctcaag
gtctttcatgccggcgggcaggacatagagattgtccacaacctgaccggcaagacgccg
cacccgatgttcgacacgcagatcgcggcgatggcgctcggccttggcgagcagatcggt
tacggcaatctggtcgaggcgtggctgggcatcacgctggacaagggcgcgcgcttcacc
gactgggcgcggcggccgctggacaagcgacagatcgactatgcgatcggcgacgtcacc
tatttgatccagatgttcccggtgatgctggaaaagctgcgcagtacggggcgcggcgac
tggctggaccaggagatggagcggatcagcgatccggaaaattacatcaaccggccgggc
gacgcatggaagcgggtccgcatatccagccgcaagcccgatgtgctgggccggttgaag
gcgctggccgcgtggcgcgagcaggaggcgcaggacaagaacttgccgcgcgggcgaatc
gtcaaggatgagacgctggcggacatcgcgtcccacccgccccggtcgcaggacgatcta
ggcaaggtccgggggctgtccgccgcgtggcggggcaatgatatcggcgcgcggatgatg
gcggctctggccggtcatgcgccgctgtccaaggatgagttgcctgaacgcgaccccaaa
aagcccgcgctgggcaaggatggggcgctggtggcggatttgctcaagctgctgctgaaa
atccggtcgcgggacatcaatgtcgcagcgcggctgctggcgcgatccgacgatctggat
gcgctggcggcgggcgtgcgggacaatctgccgatcctggagggctggcgttacgaacaa
tttgggcgggacgcggttgatctggtagaaggccgcatggcgttcgcggtgcgcaacggg
cggttgcggatgaccagaacggcagtggatggaacggaggccaaggcatga
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