Sphingobium phenoxybenzoativorans: KFK14_14550
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Entry
KFK14_14550 CDS
T07582
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
spph
Sphingobium phenoxybenzoativorans
Pathway
spph03030
DNA replication
spph03430
Mismatch repair
spph03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KFK14_14550 (dnaE)
03430 Mismatch repair
KFK14_14550 (dnaE)
03440 Homologous recombination
KFK14_14550 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spph03032
]
KFK14_14550 (dnaE)
03400 DNA repair and recombination proteins [BR:
spph03400
]
KFK14_14550 (dnaE)
Enzymes [BR:
spph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KFK14_14550 (dnaE)
DNA replication proteins [BR:
spph03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KFK14_14550 (dnaE)
DNA repair and recombination proteins [BR:
spph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KFK14_14550 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Scaffold
COE1_HLH
DUF655
Motif
Other DBs
NCBI-ProteinID:
QUT04298
UniProt:
A0A975K3Q4
LinkDB
All DBs
Position
complement(2920936..2924496)
Genome browser
AA seq
1186 aa
AA seq
DB search
MPHAPFVPLRVFSCYTMLDGAMEPKAIAKQAKALGFPAVALTDRNGLYASMAFSDGCKGE
GVQPVVGAMLGIARPGRPANAPLVIDWLALYAQDARGYDNLCELVSMAHLDRPIEEQAHV
SMDDLEGRTDGLIALTAGGEGALARLFAEDQPDAAEAVADHLEALFPGRLYIEIVRRLDP
VEGRAEPHLLDLAYARDLPLVATNPTCFAEQNFHEAHDVMLCIADGAYVDNADRRRSSPD
AWMKPAAEMKRLFEDLPEALANTLVVAQRCAVAAPKRKPILPSLAGDLEGEARQLREDAA
AGLEARLEKLGITGEEARQPYLDRLKFETDIIIQMGFPGYFLIVADFIKWAKDNDIPVGP
GRGSGAGSVVAWALTITDLDPLQLGLLFERFLNPERVSMPDFDIDFCETRRGEVIRYVQN
KYGSDHVAQIITFGKLKARAVLKDTGRVLQMSYGQVDRLAKLVPNHPTDPWTLERTMNGV
TEFVQEYKGDGQVRRLIDYAMKLEGLPRHSSTHAAGVVIGDRPLSKLVPLYRDPRSDMPV
TQFDMKYVEGAGLVKFDFLGLKTLSVLQKAVQLLKKRGVTVELETLAWDDGAVYDLLQRG
DTVGVFQLESEGMRKTLAAVRPTNFGDIIALVSLYRPGPMDNIPMFGRRKNGQESIEYPH
ILLKPILEETYGIFVYQEQVMQAAQILAGYSLGDADLLRRAMGKKIKAEMDAQRERFVKG
CAERSEIPKAKANELFDLIDKFAGYGFNKSHAAAYALLAYHTAWLKAHYPAEFYAASMAY
DIHLTDKLTVFVDDMRRMGLTCLPPDVNVSEADFSVQAVELPEDGDPRLGFAVRYALGGL
KGVGEKAMEVLVAERDANGPFLSLDDFADRVEPRLLNRRQLESLAAAGAFESIHADRAGV
HAAAETILSVAASAAEARQNGQGGLFGGEEIAHADVRIPPHQTWSNADKMAQEKDAFGFY
FSAHPVDRYRHIAEAKGARSYGLICAQPTSDAGGRTMATMAALIEEVRWRDTRRGGRYVA
ATLSDASGQFQASCFDEDSCKLIEALWKEGDCALFSVELDRQPGEETPRVTIRLAQALGQ
IANSARMELWIDVADDGAVHALAAIMGRSRGGRSEAFLRAPLPEGGMAHLFIGDDFTIDA
DLVEAIGNVPGVAIHRFETMPVNKDGYRVRSRRSQMRSVSPMRAAG
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatgcgccgttcgtcccgcttcgcgtattttcctgttacaccatgctcgacggc
gcgatggaaccgaaagccatcgccaagcaggcaaaggccctgggcttcccggcggttgcg
cttacggaccgcaacggcctctacgcctcgatggccttttccgacggatgtaagggggaa
ggcgttcaacccgtagtcggcgcgatgctgggtatcgcgcggcctgggcggccggccaat
gcgcctctcgtcatcgactggctggcgctctacgcgcaggacgccagagggtacgacaat
ctctgcgagctggtgtcgatggcgcatctcgaccggccgatcgaggagcaggcgcatgtg
tcgatggacgatctggaagggcgcacggacggcctgatcgctttgaccgcagggggcgag
ggggcgctggcaaggttgttcgccgaagatcagccggacgctgcggaggccgtggcggac
catctggaggctttgtttccaggccgcctctatatcgagattgtccgcaggcttgatccg
gtggaggggcgggcggaaccgcaccttctggatctggcctatgcccgcgacctgcctttg
gtggcgacgaaccccacctgctttgccgagcagaatttccatgaggcgcatgacgtgatg
ctctgcattgctgacggcgcctatgtcgacaatgccgaccgccggagaagctctcccgac
gcctggatgaaaccggcggccgagatgaagcggttgttcgaggatttgccggaggcgctg
gccaatacgctggtcgtcgcgcagcgctgcgccgtggcggcgccaaaacgcaagccgatc
ctgcccagccttgccggcgatctggagggcgaggcccggcagcttcgagaggatgcagcg
gcggggctggaggcgcggctggagaagctgggcattaccggcgaggaagcacggcagccc
tatctcgaccggctgaagtttgagaccgacatcatcatccagatgggcttccccggatac
ttcctgatcgttgccgacttcatcaaatgggcgaaggacaatgacattccggtggggccg
gggcgtggatcgggtgcggggtcggtcgtggcctgggcgctgacgatcaccgatctcgat
cccttgcagcttggcctgctgttcgagcgtttccttaatccggaacgcgtgtcgatgccg
gacttcgacatcgacttctgcgaaacccggcgtggcgaggtgatccgctatgtccagaat
aaatatggcagcgaccatgtggcgcagatcatcaccttcggtaagctgaaggcccgcgcc
gtgctgaaggataccgggcgcgtcctccagatgagctatggccaggtcgaccgcctcgcc
aagctggtgccgaaccacccgaccgatccgtggacgctggagcgcacgatgaacggcgtg
accgagttcgttcaggaatataagggcgatgggcaggtgcgtcggctgatcgactatgcg
atgaagctggaaggtttgccccggcacagctccactcacgcagcgggcgtggtgatcggc
gaccggccgctgtccaagctggtgccgctgtatcgcgatcctcgctccgacatgccggtg
acccagttcgacatgaaatatgtcgagggtgcggggttggtgaaattcgacttccttggc
ctaaaaacactgtcggtgctgcagaaagccgttcagttgctcaagaagcgcggcgtgacc
gtcgagctggagacgctcgcctgggatgacggggcggtttacgatcttctccagcggggc
gacacggtcggcgtgttccagttggaatcggagggcatgcgcaagacgctggccgccgtg
cgtccgaccaatttcggcgacatcatcgcgctcgtgtcactctaccggcctggtcctatg
gacaatatcccgatgttcggccgccgcaagaacgggcaggagagtattgaatatccccac
atactgctgaagccgatcctggaagagacctatggcatcttcgtctatcaggaacaggtg
atgcaggccgcgcagatcctggcgggatattcgctaggcgacgcagaccttctgcgccgc
gcgatgggcaagaagatcaaggcggagatggacgcgcagcgcgaacgcttcgtgaagggt
tgcgccgaacggagcgagattcccaaggcgaaggcgaacgaactgttcgatttgatcgac
aagtttgcgggatatggcttcaacaagtcgcacgcggctgcctacgcgctgcttgcctat
cacacggcttggctgaaggcgcattatccagcggaattctatgccgcatccatggcgtat
gacatccacctgaccgacaagctgacggtgttcgtcgacgatatgcggcgcatgggcctg
acctgcctgccgcccgatgtgaatgtcagcgaagcggatttttccgtgcaagcggtggaa
ctgccggaggatggcgatcccaggcttggcttcgctgtccgctatgcgctgggcggcctg
aagggcgtgggtgagaaggcgatggaggtgctggtcgccgaacgcgacgccaatggcccc
ttcctcagtcttgacgattttgcagaccgggtggagccgcgcctgctgaaccggcggcaa
ctggaaagcctggcggccgcgggcgcgtttgagagcattcatgccgaccgcgcaggcgtc
catgcggcggcggagacgatcctgtcggtggccgcgagcgccgccgaggcgcggcagaat
gggcagggcggcttgttcggcggcgaggagatcgcccatgccgatgtgcgcattccgccg
catcaaacatggtcgaacgccgacaagatggcgcaggagaaggatgctttcggcttctat
ttctctgcgcaccctgtggaccgttatcgtcacattgccgaggcgaagggcgcgcgcagc
tatggcctgatctgcgcccaaccaacaagcgacgccggtggacggacgatggcaacgatg
gcggcgcttattgaggaagtgcggtggcgcgacacgaggcgcggcggccggtatgttgcg
gcgacgctatcggacgccagcggccagttccaggcaagctgtttcgatgaggatagttgc
aagctgatcgaggcgctgtggaaggaaggcgattgcgcgctcttttccgtcgagcttgac
cggcagccgggcgaggagacgccgcgcgtcaccatccggctggcgcaggcgctgggccag
attgccaattcggcccggatggaattgtggatcgatgtcgctgatgatggcgctgtgcat
gcgcttgccgccattatggggcggagccgcggcggcaggagcgaggcattcctgcgcgct
cctctgccggaagggggcatggcccacctgttcatcggcgacgacttcaccatcgatgcc
gatctggtggaggcgataggcaatgtgcccggcgtcgctatccaccggttcgaaacgatg
ccggtcaacaaggatggataccgggtgcgttcccgccggtcccagatgcggtcggtcagc
ccgatgcgggcggccggataa
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