Sphingobium phenoxybenzoativorans: KFK14_15340
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Entry
KFK14_15340 CDS
T07582
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
spph
Sphingobium phenoxybenzoativorans
Pathway
spph03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KFK14_15340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spph03400
]
KFK14_15340
Enzymes [BR:
spph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KFK14_15340
DNA repair and recombination proteins [BR:
spph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KFK14_15340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_3primeBD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
Zn_ribbon_6
AAA_30
AAA_22
zf_Rg
PIF1
Bac_DnaA
Motif
Other DBs
NCBI-ProteinID:
QUT04428
UniProt:
A0A975K5F8
LinkDB
All DBs
Position
3099189..3101357
Genome browser
AA seq
722 aa
AA seq
DB search
MTRARVLLLNAALGPLDYRVPHGMQVEPGSIVVAPLGPRQLVGVVWEPESFQEAETVGDN
RLRNLLAVLDAPPIPAPLRRLIEWTADYYLAPPAAVLRMALASLSALEGARTVIEYRPTG
DAPDRMTEQRTQALERIGGRQGLVRELALIGGVSDAVIRGLVKSGAFEPVEVSTDTPFPD
PDPDFAPPALSEEQSAAAARFVAAVDAQTFEPFLLDGVTGSGKTEVYFEAIASAIRGGRQ
VLVLLPEIALTEPFLERFEKRFGTVPVSWHSGLRQSERRRAWRAISSGQAKVVVGARSAL
FLPYAALGLIVVDEAHETSFKQEDGVHYHARDVAVMRGLQEGCPVILASATPAIETRHQV
EIGRYTEIKLPGRYGGAEMPEIVGLDLLSDPPERGRWIAPPLVKAIDEVLEKGEQALLFL
NRRGYAPLTLCRHCGHRFQCPNCTAWMVEHRLTSRLACHHCGHVLPTPKVCPECREEDSL
VACGPGVERIADEVAARWPTARTAIVTSDTLWSPAKAAEFVKSVEGGDIDIIVGTQLVTK
GYHFPNLTLVGVIDADLGLEGGDLRASERTFQQIVQVSGRAGRGEKPGRVFLQTRMMEAG
VIKALIAGDSERFYAAETESRRRANAPPFGRFAAIIISSEDSREAAETARLIGKSAPQID
GMSVYGPAPAPLSVLRGRHRHRLLVHATRQLDVQAAIREWLGNVVWKSGTRVAVDVDPYS
FV
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgactcgcgcccgcgtcctcctcctcaatgcagccctcggcccgctcgactatcgcgtc
ccccacggcatgcaggtggagccgggcagcattgtcgtagcgcccctcggcccgcggcag
cttgtcggcgtggtgtgggagccggagagtttccaggaggcggagacagtgggcgacaac
cggctccgtaacctgctggccgtgctggacgcgccaccaatccccgcaccgctccgccgc
ctgatcgaatggacggctgactattatctcgctccgcctgccgccgtgctgcgcatggcg
cttgcctccctgtccgcgctggagggcgcgcgcaccgtcatcgaatatcgcccgaccggc
gacgcgcccgaccgcatgacggagcagcgcacccaggccctcgaacgcatcggcgggcgg
caggggctggtgcgcgaactggcgctgatcggcggcgtgtccgacgccgtgatccggggc
ctcgtcaaatccggcgcgttcgaacccgtggaggtctccaccgacacccccttccccgat
cccgatccggacttcgccccgcccgcgctcagcgaggaacaatccgccgccgccgcccgc
ttcgtcgcggccgtcgatgcccagacattcgagcctttcctgctcgacggcgtcaccggc
tccggcaagacggaagtctatttcgaggcgatcgccagcgccatccgcggcgggcggcag
gtgcttgtcctgctccccgaaatcgccctcaccgaacctttcctcgaacggttcgagaaa
cgcttcggcaccgtgcccgttagctggcacagcggcctgcgccagtcggagcgccgccgc
gcgtggcgcgccatttcgtcgggccaggcgaaggtcgtcgtcggcgcccgctccgcactg
ttcctgccctatgcggccctcggcctgatcgtcgtcgatgaggcgcacgagaccagcttc
aagcaggaggatggcgtccattatcacgcccgcgacgtggcggtgatgcgcggacttcag
gaaggatgcccggtcatcctcgcctccgccacgcccgccatcgaaacccggcatcaggtg
gagatcggccgctatacggagatcaagctgcccggccgctatggcggcgcggaaatgccg
gagattgttggcctggacctgctgtccgatccgccggagcgcggccgctggatagcgccg
ccgcttgtgaaggccatcgacgaagtgcttgaaaagggggagcaggctctcctctttctt
aaccgccgcggttatgccccgctcaccctgtgccgccattgcggccatcgcttccaatgc
cccaactgcactgcatggatggtcgagcaccgcctcaccagccgcctcgcctgccaccat
tgcggccatgtcctgccaacgccaaaggtctgccccgaatgccgggaggaggacagcctg
gtcgcctgcggccccggtgtcgagcgtatcgccgatgaggtcgccgcccgctggcccacc
gcccgcaccgccatcgtaacatcggacacgctctggtccccggccaaggcggccgagttc
gtgaaaagtgtcgagggcggcgacatcgacatcatcgtcggcacgcagcttgtgacgaag
ggctatcatttccccaacctcaccctcgtcggcgtgatcgacgcggatctggggctggag
ggcggcgacctgcgcgcctccgagcgcactttccagcagatcgtgcaggtctccggccgc
gccggacgcggggaaaagcccggccgcgtattccttcagacgcggatgatggaggcgggc
gtcatcaaggcgctgatcgccggggattccgaacgcttctacgccgccgaaaccgaaagc
cgccgccgcgccaatgccccgcctttcggccgcttcgccgccatcatcatatccagcgag
gattcgcgcgaggccgccgaaaccgcccgcctgatcggcaagagcgcgccgcagatcgac
ggcatgagcgtatatggccccgcgcccgccccgctctccgtcctgcgcggccgccaccgc
caccgcctgcttgtccacgccacccgccagctcgacgtgcaggcggcgatccgcgaatgg
ctgggcaatgtcgtctggaaatccggcacccgcgtcgccgtggacgtcgacccctacagt
tttgtctag
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