Sphingobium phenoxybenzoativorans: KFK14_17330
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Entry
KFK14_17330 CDS
T07582
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
spph
Sphingobium phenoxybenzoativorans
Pathway
spph03030
DNA replication
spph03410
Base excision repair
spph03420
Nucleotide excision repair
spph03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KFK14_17330 (polA)
03410 Base excision repair
KFK14_17330 (polA)
03420 Nucleotide excision repair
KFK14_17330 (polA)
03440 Homologous recombination
KFK14_17330 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spph03032
]
KFK14_17330 (polA)
03400 DNA repair and recombination proteins [BR:
spph03400
]
KFK14_17330 (polA)
Enzymes [BR:
spph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KFK14_17330 (polA)
DNA replication proteins [BR:
spph03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KFK14_17330 (polA)
DNA repair and recombination proteins [BR:
spph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KFK14_17330 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KFK14_17330 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
DprA_N
HHH
HAMP_N3
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QUT04782
UniProt:
A0A975Q0X7
LinkDB
All DBs
Position
complement(3494308..3497118)
Genome browser
AA seq
936 aa
AA seq
DB search
MSENQTAAAKPNHLYLVDGSGYIFRAYHQLPPLTNRHGQPVGAVYGYTSMLWKLAAELDK
ADGPTHLAVVLDKGSHTFRNDMYDQYKAHRPPPPEDLVPQFPLIRDATRAFSLPCIEEAG
FEADDIIATYTCRAVEAGWNVTIVSSDKDLMQLIQPGVDMYDTMKNERRGADYVVGKFGV
PPEKLGDVLALMGDSVDNVPGVPGIGPKTASKLITEYGDLESVLAAAPSMKKSKMQENLI
EHSDMARLSRKLVALHCEMTLPEPLDDLTLKGIPEEPLRDFLEHHGFKALLNRLGGPAAA
VAVAAASAAITSGTPPPPPQIEDAPPIDCSAYETVVTEEALDRWIAAAYAEGIVAVDTET
SALDAVSAALVGVSLSTGPNLACYIPVGHGGMDMFAEKPLQLPLDLVLAKLKPLLEDDSI
LKVGQNIKYDLTVLGRHGITVAPFDDTIVMSFDLDAGQSLAGHGMDEAAKTHLGHTCISF
KDVVGSGKNQISFAEAQLDKATAYAAEDADVTLRLWKLFKPRLHQEGATRIYEMVDRPLV
PVIAKMEHTGIKVDREHLSRLSSEFTDGIARLEGEIHALAGQPFAIGSTQQLGAILFDKL
GLKGGKKGKSGAYSTDVTILEKLKAEGSEISGKVLDWRQLSKLKSTYTDALQQQINAQTG
RVHTSYSLTGAQTGRLSSNDPNLQNIPIRTETGRQIRHAFVAEPGNVILAADYSQIELRL
AAHMADVPALKEAFANGEDIHNRTAEELFGEVNRDTRGRAKTINFAILYGISRWGLASRL
EISADEAQDMISRYYERFPGISVYINETLEKARARGYTETLFGRKTWFPRIRASIQHERQ
GAERAAINAPIQGTSADIIKRAMARMGPALEKAGLPDVKMLLQVHDELVFELPESDVEAA
SAIIRDTMAGAAEPAVKLSVPLGVEIGTGPSWGAAH
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagaatcaaaccgccgccgcgaaacccaaccacctctacctcgtcgacggcagc
ggctatatcttccgcgcctatcatcagcttccgccgctcaccaaccggcacgggcagccg
gtcggcgcggtctacggctacacatcaatgctgtggaagctggccgcggagctggacaag
gcggacggtccgacccacctcgccgtggtgctggacaagggcagccataccttccgcaac
gacatgtatgaccagtataaggcgcaccgtccgccgccgccggaggatctggtcccccaa
ttcccgctgatccgggacgcgacccgcgccttctcgctgccctgtattgaagaggctggt
ttcgaggccgacgacatcatcgccacctacacctgccgcgcggtggaggcggggtggaat
gtcaccatcgtcagctccgacaaggacctgatgcagctcatccagcccggtgtcgacatg
tacgacacgatgaagaatgagcggcgcggcgcggattatgtcgtgggcaagttcggcgtg
ccgcccgaaaagctgggcgatgtgctggccctgatgggcgacagcgtggacaatgtcccc
ggcgtccccggcatcggccccaagaccgcgtcgaagctgatcaccgaatatggcgacctg
gaatcggtgctcgccgccgcgccttcgatgaagaagtcgaagatgcaggaaaacctgatc
gagcatagcgacatggcccgcctctcgcgcaagctggtcgcgctccattgcgagatgacg
ctgccggagccgctcgacgacctgacgctcaagggcattccggaagaaccgttgcgcgat
ttccttgagcatcacggcttcaaggcgctgcttaatcgcctgggcggaccggccgcggcc
gtagccgtggccgcggcgtccgccgctatcacttccgggacgcctccgccgccgccccag
atcgaggacgcgccgccgatcgactgctccgcctatgaaacggtcgtgacggaggaggcg
ctggatcgctggatcgctgccgcctatgccgaagggatcgtggcggtggatacggaaacg
agcgcgctcgacgcggtgtccgccgcgcttgtcggggtcagcctgtccaccggacccaac
ctcgcctgctacatcccggtcgggcatggcgggatggacatgttcgcggaaaagccgttg
cagcttccgctcgatctggtcctcgcaaagctcaagccgctgctggaggacgacagcatc
ctgaaggtcgggcagaatatcaaatatgacctgactgttctgggccgccacggcatcacc
gtcgcgccgttcgatgacacgatcgtcatgagtttcgacctcgacgccgggcagagcctt
gcgggacatggcatggatgaggcggccaagacccatctcggccacacctgcatcagcttc
aaggatgtggtcggctccggcaagaaccagatcagcttcgccgaggcgcaactggacaag
gcgaccgcctacgccgccgaggatgccgacgtcaccctgcgcctgtggaagctgttcaag
ccgcgtctgcatcaggaaggggcgacccgcatttatgaaatggtcgaccgcccgctcgtc
cccgtcatcgcgaagatggagcataccggcatcaaggtcgaccgcgagcatctctcgcgc
ctgtcgagcgagttcacggacggcatcgcccggctggagggggaaatccatgcgctcgcc
ggtcagcccttcgccatcggctccacgcagcagcttggcgcgatcctgttcgacaagctg
ggcctgaagggcggcaagaagggcaagtccggcgcttactccaccgatgtcacgatcttg
gagaagctgaaggccgaagggtcggagatttccggcaaggtgctcgactggcggcagcta
tccaagctcaagtcgacctataccgacgcgctgcagcagcagatcaacgcgcagaccggc
cgcgtccacaccagctactcgctgaccggcgcgcagaccggccgcctgtcatccaacgac
cccaatcttcagaacattccgatccgcacggagaccggccgccagatccgccacgccttc
gtcgcggagccgggcaatgtcatcctcgccgccgactatagccagatcgaactgcgcctc
gccgcccatatggcggacgtgcccgcgctcaaggaggcgttcgcgaacggtgaggacatt
cacaaccgcacggcggaggaactgttcggagaggtcaaccgcgacacgcgcggccgggcc
aagacgatcaacttcgccatcctctacggcatcagccgctggggcctcgcctcccggctg
gagatcagcgcggacgaggcgcaggacatgatctcccgctattatgagcgtttccccggc
atcagcgtctacatcaacgagacgctggagaaggcgcgggcgcgcggctacaccgaaacc
ctgttcggccggaaaacctggttcccccgcatccgcgcctcgatccagcatgagcggcag
ggggccgagcgcgccgcgatcaacgcgccgatccagggcaccagcgccgacatcatcaag
cgggcgatggcgcgcatgggacctgcgctggagaaggcggggctgccggacgtgaagatg
ctgctgcaggtccatgacgaactggtgttcgaactgcccgaaagcgatgtggaggcggcc
agcgcgatcatccgcgacacgatggcgggcgcggccgaaccggcggtgaagctcagcgtg
ccgctgggggtagagatcggcaccggcccaagctggggcgcggcgcattaa
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