Sphingobium phenoxybenzoativorans: KFK14_21990
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Entry
KFK14_21990 CDS
T07582
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
spph
Sphingobium phenoxybenzoativorans
Pathway
spph04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
spph00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
KFK14_21990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spph03019
]
KFK14_21990
03009 Ribosome biogenesis [BR:
spph03009
]
KFK14_21990
04131 Membrane trafficking [BR:
spph04131
]
KFK14_21990
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spph04147
]
KFK14_21990
Messenger RNA biogenesis [BR:
spph03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
KFK14_21990
Ribosome biogenesis [BR:
spph03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
KFK14_21990
Membrane trafficking [BR:
spph04131
]
SNARE
SNARE associated proteins
Others
KFK14_21990
Autophagy
Aggrephagy
Other aggrephagy associated proteins
KFK14_21990
Exosome [BR:
spph04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
KFK14_21990
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
CDC48_2
AAA_22
AAA_5
AAA_33
AAA_14
AAA_2
TIP49
IstB_IS21
nSTAND3
NPHP3_N
AAA_28
RNA_helicase
AAA_18
Mg_chelatase
Sigma54_activat
AAA_17
AAA_7
nSTAND_NTPase5
AAA_lid_PRS2_C
AAA_30
ABC_tran
AAA_11
AAA_3
TsaE
DUF815
AAA_24
AAA_25
Zeta_toxin
Parvo_NS1
NB-ARC
ATPase
Vps4_C
PhoH
SLFN-g3_helicase
Viral_helicase1
MazE_antitoxin
AstA_C
Motif
Other DBs
NCBI-ProteinID:
QUT05596
UniProt:
A0A975K6A9
LinkDB
All DBs
Position
4423022..4425319
Genome browser
AA seq
765 aa
AA seq
DB search
MADQETAGRRIQVANARPEDAGRGLARLPQTVMAELGVSEGDAIEIVGKRSTPARVVRPY
KEDEGLDVLRLDGLQRANAGVGSGDFVQISRIEPRAAQRVVFAPAQQNLRLQGNPEALKR
VFFERPLTAGDVVATAGQQQVDRGDMPANLRQMLAAPAYALQEIRLAVVSTSPKGIVTID
ADTEVELRAEYEEPKESRRADVTYDDVGGMAETIDQLREMVELPLRYPELFQRLGVDPPR
GVLLHGPPGTGKTRLARAVANESDAEFFLINGPEIMGSAYGESEKKLREIFEEATKASPS
ILFIDEIDSIAPKRGQVQGETEKRLVAQLLTLMDGLEARTNLVVIAATNRPEAIDEALRR
PGRFDREIIVGVPDERGRREILGIHTRGMPLGDKVDLSELARTTYGFVGADLAALTREAA
IEAVRRFMPRLNLEDGTIPADVLEELMVTREDFLAAIKRVQPSAMREVMVQAPNIGWDDI
GGLDDAQMRLKEGVELPLKDPDAFRRIGIRPAKGFLLYGPPGTGKTLLAKAVAREAQANF
IATKSSDLLSKWYGESEQQIARLFARARQVAPTVIFIDELDSLVPARGNGMGEPQVTERV
VNTILAEMDGLEELQSVVVIGATNRPTLVDPALLRPGRFDELIYVPVPDKEGRRRILKIH
TGKMPLADDVDLDSLAERTERFTGADLEDLVRRAGLFALRESLKVEKIDQGHFEKALLET
RASVTPETEAEYEAIQAKLKQSVFEAASIGFVSPGMLTSRGPKVP
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccaggaaacagccggacgcaggatacaagttgccaacgccaggccagaggat
gccgggcgcggattggcgcgtttgccgcagactgtcatggcagagcttggggtttcagag
ggcgatgccatcgaaatcgtcggcaagcgctcaacgcctgcgcgagtcgttcgcccctat
aaggaggatgaggggctggatgtgctgcggctagatggtctccagcgcgccaatgccgga
gtcggctctggcgatttcgtacagatcagccggattgagccccgcgcggcacaacgggtc
gtctttgcccctgctcagcagaatctgcgcctgcagggtaatcccgaagcattgaagcgg
gtgttcttcgaacgccccctgactgcgggcgatgtcgtcgccaccgcgggacagcagcag
gtagaccggggtgatatgccggccaacctgcggcagatgctcgccgcccctgcctacgcg
ctgcaggaaatccggctcgccgttgtttcgacctctcctaaaggcattgtaacgatcgat
gccgatacagaggtcgaactgcgcgccgaatatgaagaacccaaggaatcccgccgcgcg
gacgtcacttatgatgatgtcggcggcatggcggagaccatcgaccagttgcgggagatg
gtcgagctgccgctgcgctatcctgaactgttccagcgccttggtgtcgatccgccccgt
ggcgtcctgctgcatggcccgccgggcaccggcaagacccgcctcgcccgcgcggtcgcc
aacgaaagcgatgcggaatttttcctgatcaacggtccggagatcatggggtctgcctat
ggcgaatcggaaaagaagctgcgcgagattttcgaagaggccacgaaggcttctccgtcg
atcctgttcatagacgaaatcgattcaatcgcacccaagcgcggacaggtgcagggcgaa
accgagaagcgccttgtcgcgcaactgctgacgctgatggacgggttggaggcaagaacg
aaccttgtcgtcatcgcggccaccaatcgaccggaagccattgacgaagcattacgccgt
cctggccgattcgaccgcgaaatcatcgtcggcgtacctgatgaacgcgggcgtcgtgag
atattgggtattcacacgaggggcatgccgttgggggacaaggtcgacttgtcggaactg
gcacgcacgacatacggctttgtcggcgctgatcttgccgccttgacacgtgaggcggcg
attgaagcagtgcgacgcttcatgcctcgtctcaatctggaagacggcacgatcccggcg
gacgtgctggaagagctcatggtcacgcgcgaggatttccttgccgccatcaagcgcgtg
cagccgtccgcgatgcgcgaggtcatggtgcaggcacccaacattggttgggatgatatt
ggcggcctcgacgatgcgcagatgcgcctcaaggaaggcgtggaactaccgctgaaagac
ccggacgctttccggcgtattggcatccgtccggcgaagggctttctgctgtacggaccg
cctggcactggcaagacattgctcgccaaagcggtggcgcgagaggcgcaggcgaatttc
atcgccaccaagtcaagcgaccttttgtccaaatggtatggcgagagcgagcagcagatc
gcacggctgttcgcccgtgcgcgacaggtcgccccaacggtgatcttcatcgatgagctc
gacagcctggttcctgcgcgtgggaacggcatgggcgaaccgcaggtgacggaacgggtc
gtgaacaccatcctggcagagatggacgggctggaggaactacagtcagtggtggtcatc
ggtgcgacgaaccggccgacattggtcgatccggcgctgctccgccccggacgtttcgac
gaacttatctatgtcccggtgcccgacaaggagggccggcgacgcatcctgaagatccac
acaggaaaaatgcctctagccgacgatgttgacctcgacagcctggcggaaaggaccgag
cgctttacaggagccgatttagaggatcttgtccgccgggcgggtctttttgccctgcgc
gaatccttgaaggtcgaaaagatcgatcaagggcatttcgagaaggccctgctggagacg
cgtgcttcagtgacgccggaaacagaagccgaatatgaggctattcaggccaaattgaag
caatcggttttcgaggcggcttccatcgggtttgtgtcgccagggatgctgacatcgcgt
ggtcccaaagtgccctga
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