Sphingobium phenoxybenzoativorans: KFK14_23340
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Entry
KFK14_23340 CDS
T07582
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
spph
Sphingobium phenoxybenzoativorans
Pathway
spph02020
Two-component system
spph02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
spph00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KFK14_23340
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KFK14_23340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spph03021
]
KFK14_23340
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
spph02035
]
KFK14_23340
Transcription machinery [BR:
spph03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KFK14_23340
Bacterial motility proteins [BR:
spph02035
]
Flagellar system
Flagellar assembly proteins
Stator
KFK14_23340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
DUF1492
tRNA-synt_1c
Motif
Other DBs
NCBI-ProteinID:
QUT05832
UniProt:
A0A975Q1W0
LinkDB
All DBs
Position
complement(4717705..4718436)
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AA seq
243 aa
AA seq
DB search
MHMSKISAEGSLTYGKGGVHTPEQLARKYMPLVRKIAWHVHGRVSSAIEIEDLLQIGMVA
LVEAANGFEDRGFGFATYAQMRIRGAMIDHLRRHATICRSAMSKRKQLAAARDQLEQRLG
RAPLEAELSRHMGMEPADFREFADSVEIVQTTSMDEVYSDQSMWFADVEDRADEVMERES
LKAMLAKCIGDLPQREAMVLQLYFVEEMNLEEIGQTLDIGAARVCQIKKAALDKLRELLR
EWA
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgcatatgagcaagatcagcgccgaaggcagccttacctatggcaagggcggggtgcac
acgccggaacaattggcgcgcaaatatatgccgctggtgcgcaagatcgcctggcacgtc
catggccgggtatcgagcgccatcgagattgaggacctgctgcagatcggcatggtcgca
ctggtcgaggccgcgaacggtttcgaggatcgcggcttcggctttgcgacctatgcccag
atgcggattcgcggcgcgatgatcgatcatctgcgccgccatgcgacgatctgccgctcc
gccatgtcgaagcgcaaacagctcgccgccgcgcgcgaccaactggaacagagacttggc
cgtgcgccgctggaggccgagctttcccggcatatgggcatggaaccggccgactttcgc
gagttcgccgacagcgtggagattgtccagaccaccagcatggatgaggtctattccgac
cagtccatgtggttcgccgatgtcgaggaccgcgccgacgaggtgatggagcgcgagtcg
ctgaaagccatgctggccaaatgcatcggcgaccttccgcagcgcgaggcgatggtgctg
caactctatttcgtcgaggaaatgaacctggaggaaatcggccagacgctggacataggc
gcggcgcgggtctgccagatcaagaaggctgcgctggacaagctgcgggaattgctgcgc
gagtgggcgtga
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integrated database retrieval system
