Salmonella enterica subsp. enterica serovar Paratyphi B: SPAB_00235
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Entry
SPAB_00235 CDS
T00628
Name
(GenBank) hypothetical protein
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
spq
Salmonella enterica subsp. enterica serovar Paratyphi B
Pathway
spq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPAB_00235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spq03019
]
SPAB_00235
Enzymes [BR:
spq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
SPAB_00235
Messenger RNA biogenesis [BR:
spq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SPAB_00235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
PhoR
Motif
Other DBs
NCBI-ProteinID:
ABX65677
UniProt:
A0A3Z1ECG1
LinkDB
All DBs
Position
complement(214722..216140)
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AA seq
472 aa
AA seq
DB search
MTLPRCAIFTRVANFCRKVLSREESEAEQAVARPHMTIIPREQHAISRKDISENALKVLY
RLNKAGYEAYLVGGGVRDLLLGKKPKDFDVTTNATPDQVRKLFRNCRLVGRRFRLAHVMF
GPEIIEVATFRGHHEGSESDRTTSQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVA
DFTVRDYVGGMQDLQEGVIRLIGNPETRYREDPVRMLRAVRFAAKLNMRISPETAEPIPR
LATLLNDIPPARLFEESLKLLQAGNGFETYQQLREYHLFQPLFPTITRYFTENGDSAMER
IIALVLKNTDNRIRNEMRVNPAFLFAAMFWYPLLEMAQKIAQESGLAYYDAFALAMNDVL
DEACRSLAIPKRLTTLTRDIWQLQLRMSRRQGKRAWKLMEHPKFRAAFDLLELRAQVENN
TELQRLAQWWAEFQASAPPEQKGMLNELDDDPAPRRRRSRPRKRAPRREGTV
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgacactaccgaggtgcgctatttttacccgagtcgctaatttttgccgtaaggtgtta
agccgcgaggagagcgaggcagaacaagccgtcgcccgtccacatatgacgattatcccg
cgtgaacagcacgctatctcccgcaaagatatcagtgaaaatgccctcaaggtactgtac
aggctgaacaaagcgggctatgaagcctacctggtcggcggcggcgtccgcgatctcctg
ctcggcaaaaagccgaaggatttcgacgtgaccaccaacgcaacaccggatcaggtacgg
aaattattccgcaattgccgtctggtggggcgtcgtttccgcctggctcacgtgatgttt
ggcccggaaattatcgaagtggcaacgtttcgtggtcatcatgaaggcagtgaaagcgac
cgtacgacctcccagcgtgggcaaaacggtatgctgctgcgcgataatatcttcggctct
atcgaagaagatgcccagcgccgcgatttcaccatcaacagcctttactacagcgtggcg
gattttaccgtgcgcgattacgtcggcgggatgcaggatctgcaagaaggcgtgattcgc
ctgatcggcaatccggaaacgcgctaccgcgaagatccggttcgaatgctgcgcgccgtg
cgtttcgctgcgaagctcaatatgcgtatcagccctgaaacggctgagccaatcccgcgt
ctggcaaccttgctaaacgacattcctcccgcgcgcctgttcgaagagtcgctgaagctg
ttgcaggcggggaacggttttgaaacctatcaacaactgcgggaataccacctcttccag
ccgttgtttcctaccattacgcgttatttcaccgaaaacggcgacagcgcaatggaacgc
atcattgcgctggtgttgaagaatacggataaccgcatccgtaacgaaatgcgcgttaat
ccggcatttttgtttgccgccatgttctggtatccgctgctggaaatggcgcaaaaaatc
gctcaggagagcggtctggcctattacgacgctttcgcgctggccatgaatgacgtgctg
gatgaagcctgccgttcgctggcgatcccgaaacgtctgaccacgcttacccgtgatatt
tggcagcttcagttacggatgtcccgtcgtcagggcaaacgcgcctggaagctgatggaa
catcctaaattccgcgccgcgtttgatttgctggagctgcgcgctcaggtggaaaataat
actgagctgcaacgtctggcgcagtggtgggccgagtttcaggcttccgcgccgccggaa
caaaaagggatgctcaacgagctggacgacgatcctgctccacgccgccgccgttcacgt
ccgcgcaaacgcgcgccgcgccgcgagggcaccgtatga
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