Salmonella enterica subsp. enterica serovar Paratyphi B: SPAB_00295
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Entry
SPAB_00295 CDS
T00628
Name
(GenBank) hypothetical protein
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
spq
Salmonella enterica subsp. enterica serovar Paratyphi B
Pathway
spq03030
DNA replication
spq03430
Mismatch repair
spq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPAB_00295
03430 Mismatch repair
SPAB_00295
03440 Homologous recombination
SPAB_00295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spq03032
]
SPAB_00295
03400 DNA repair and recombination proteins [BR:
spq03400
]
SPAB_00295
Enzymes [BR:
spq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SPAB_00295
DNA replication proteins [BR:
spq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SPAB_00295
DNA repair and recombination proteins [BR:
spq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SPAB_00295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ABX65736
UniProt:
A0A6C6YXW4
LinkDB
All DBs
Position
270497..273931
Genome browser
AA seq
1144 aa
AA seq
DB search
MIDGLAKTGPLVKKAASLGMPALAITDFTNLCGLVKFYGAGHGAGIKPIVGADFNVHNEL
LGDELTHLTVLAANNTGYQNLTLLISKAYQRGYGAAGPIIERDWLVELKEGLILISGGRM
GDVGRCLLRGNQALVEECVAFYETHFPDRYFLELIRTGRQDEETYLHAAVELAEARGLPV
VATNDVRFLESDDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYMRSEEEMCELFSDIPEA
LENTVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDYLVKKSKEGLEERLAFLFPDEEERKK
RRPEYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGPGRGSGAGSLVAYALKI
TDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVADMYGRDAVSQIITFGTM
AAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQLPEIYEADEEVRALID
MARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEEGKHPVTQFDKSDVEYAGLVKFDF
LGLRTLTIINWALEMINKRRAKNGEPPLDIAAIPLDDKKSFDMLQRSETTAVFQLESRGM
KDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREELSYPDVQWQHESLKPV
LEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEMAKQRSVFEEGAKKNGI
DGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAEFMAAVMTADMDNTEK
VVGLVDECWRMGLKILPPDINSGLYHFHVNDEGEIVYGIGAIKGVGEGPIEAIIDARNQG
GYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMNSLGDALKAADQHAKAE
AIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLYLTGHPINQYLKEIERY
VGGVRLKDMHPTERGKVTTAAGLVIAARVMVTKRGNRIGICTLDDRSGRLEVMLFTDALD
KYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKYARGLAISLTDRQIDDQ
LLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSDRLLNDLRGLIGSEQVE
LEFD
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatgggctggcgaagaccgggccgctggtgaaaaaggcggcctcattaggtatg
cctgcgctggcgatcaccgattttaccaacctctgcggtctggtgaagttctacggagcg
ggtcatggcgcgggcattaaacccatcgtcggggcggactttaacgttcacaacgaactg
ctgggagatgagctgactcatctgacggtactggcggcgaataatacgggataccagaac
ttgacgttgctgatctcgaaagcgtatcagcgcggctacggcgcggcaggcccgattatc
gagcgcgactggttggtagagcttaaagaaggtttgattctgatttccggcggacgcatg
ggcgacgtaggccgctgtctgctacgcggcaaccaggcgctggtggaggagtgcgttgct
ttctatgaaacgcattttcccgatcgctacttcctggaactgatccgtaccggcagacag
gacgaagagacctatctccatgctgcggttgaactggctgaggcacgtggtttgccggtt
gtcgcgacaaacgatgtccgtttccttgaaagcgatgattttgacgcccatgagattcgt
gtcgcgatccacgacggtttcacgctcgacgatcctaaacgtccacgcaattattcaccg
cagcagtatatgcgcagtgaagaagaaatgtgcgagctgttctccgatattccggaggcg
ctggaaaatacggtggagattgccaaacgctgcaacgtaacggtgcgtctgggtgaatat
ttcctgccgcagttcccgaccggcgatatgaccaccgaagattatctggtcaaaaaatcg
aaagaggggctggaagagcgtctggctttcctgtttccggacgaagaagagcgcaaaaag
cgtcgcccggaatatgacgagcgtctggatattgaactacaggttatcaaccagatgggg
ttccctggctacttcctcatcgtgatggagtttatccagtggtcaaaagataacggcgtg
ccggtagggccgggacgtggttccggggctggttcgctggtggcctacgcgctgaaaatt
accgaccttgatccgctggaatttgacctgctgttcgaacgtttcctgaacccggaacgt
gtctcgatgcctgacttcgacgttgacttctgtatggagaaacgcgaccaggtgattgag
cacgtcgcagacatgtacgggcgtgatgcggtatcgcagattatcaccttcggtacgatg
gcggcgaaagccgttatccgcgatgtgggccgcgtgctggggcatccgtacggttttgtc
gatcgtatctcgaagctggtgccgcccgatccgggcatgacgctggcaaaagcctttgaa
gcggaaccgcaactgccggaaatttacgaggcggatgaagaggtcagagcgctgatcgat
atggcgcgtaagctcgaaggcgtcacgcgtaacgccggtaagcacgctggcggcgtggtc
atcgcgccgaccaaaattaccgactttgcgccgctgtactgcgatgaagagggcaagcat
ccggttacccagtttgataaaagcgacgtggaatatgccgggctggtgaagttcgacttc
ctcggtttgcgtacgctgactatcatcaactgggcgctggagatgatcaacaagcggcgg
gcgaagaatggcgagccaccgctggatatcgctgccattccgctggacgataaaaaaagc
ttcgacatgctgcagcgctcggaaaccacggcggtcttccagcttgaatcgcgcggcatg
aaagatctgatcaaacgtctgcagccggactgctttgaagatatgatcgcgctggtggcc
ctgttccgtcccggcccgttgcagtcagggatggtagataacttcatcgaccgtaagcac
ggtcgtgaagaactctcttacccggacgttcagtggcagcatgaaagcctgaagccggta
ctggagccgacctacggcatcattctgtatcaggaacaggtgatgcagattgcccaggta
ctttccgggtatactctcggcggcgcggatatgctgcgtcgtgcgatgggtaagaaaaag
ccggaggagatggccaaacagcgttccgtttttgaagaaggcgcgaaaaagaacggtatc
gacggcgaactggcgatgaaaatctttgacctggtggagaaattcgccggttacgggttt
aacaaatcgcactccgccgcttatgcgctggtttcttaccagacgctatggctaaaggcg
cactatccggcagagtttatggcggcggtgatgactgccgatatggacaacaccgagaag
gtcgtcggcctggtggacgagtgctggcggatgggactgaaaattctgccgccggatatt
aactccgggttgtaccatttccacgttaatgatgagggcgagatcgtctacggcatcggc
gcgatcaaaggcgtcggcgaagggccgatcgaagcgatcatcgacgcgcgtaatcagggc
ggctatttccgcgagctgtttgatctgtgcgcgcggaccgacaccaaaaagctcaaccgc
cgggtgctggaaaagctgatcatgtccggggcgttcgaccgcctggggccgcaccgcgcc
gcgctgatgaactcattgggcgatgcgctgaaagccgccgaccagcacgccaaagcggaa
gctatcggtcaggcggatatgttcggcgtactggcggaagagccggagcaaatcgagcaa
tcctatgccagctgccagccgtggccggagcaggtggtgttagatggggaacgtgaaacg
ttggggctgtacctgacgggccaccccatcaatcagtatttaaaagaaattgagcgctat
gtcggcggggtaaggctcaaagacatgcatccgacagaacgtggtaaagtcaccacggct
gcggggctcgtgattgccgcaagggttatggtcaccaagcgcggcaatcgtatcggcatc
tgtacgctggatgaccgttccgggcgtctggaagtgatgttatttaccgacgcgctggat
aaataccagcagttgctggaaaaagaccgcatacttatcgtcagcggacaggtcagcttt
gatgacttcagcggggggcttaaaatgaccgcccgcgaagtgatggatattgacgaagct
cgcgaaaaatacgctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccag
cttttaaaccgactccgtcagtctctggaaccccaccgctcggggaccattccagtacat
ctctactatcagagggcggatgcgcgtgcgcggctgcgttttggcgcaacgtggcgtgtc
tctccgagcgatcgtttacttaacgatctgcgtggcctcattggttcggagcaggtggaa
ctggagtttgactaa
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