Salmonella enterica subsp. enterica serovar Paratyphi B: SPAB_04093
Help
Entry
SPAB_04093 CDS
T00628
Name
(GenBank) hypothetical protein
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
spq
Salmonella enterica subsp. enterica serovar Paratyphi B
Pathway
spq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPAB_04093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spq03019
]
SPAB_04093
03016 Transfer RNA biogenesis [BR:
spq03016
]
SPAB_04093
Enzymes [BR:
spq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SPAB_04093
Messenger RNA biogenesis [BR:
spq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SPAB_04093
Transfer RNA biogenesis [BR:
spq03016
]
Prokaryotic type
tRNA degradation factors
SPAB_04093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_2
KH_2
aRib
OB_RRP5_4th
S1_RRP5
KH-I_KHDC4-BBP
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
ABX69420
UniProt:
A9N728
LinkDB
All DBs
Position
complement(3409492..3411657)
Genome browser
AA seq
721 aa
AA seq
DB search
MPSKIGKDIILLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKA
KPGQDFFPLTVNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNE
VQVIATVVSVNPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQDEL
KESKLDLVVAGTEAAVLMVESEAELLSEDTMLGAVVFGHEQQQVVIQAINDLVKEAGKPR
WDWQPEAVNDALNARVAALAESRLSDAYRITDKQERYAQVDVIKSETIEQLIAEDETLDA
NELGEILHAIEKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQA
LVTATLGTARDAQVLDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRG
VLAVMPDMDKFPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVK
EGDNYVVLSDILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGAR
LHILGVMEQAINAPRGDISEFAPRIHTIKISTDKIKDVIGKGGSVIRALTEETGTTIEIE
DDGTVKIAATDGEKAKYAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVH
ISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATEQSQPAAAPEAPASEQA
E
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcaaaaattggaaaggatattattttgcttaatccgatcgttcgtaaattccag
tacggtcagcataccgttacgctggaaactggcatgatggcgcgtcaggccactgccgct
gttatggtaagcatggatgacaccgccgtattcgttaccgttgtcggccagaaaaaagcc
aagccaggccaggacttcttcccactgaccgttaactatcaggagcgtacctacgctgct
ggtcgtatcccgggcagcttcttccgtcgtgaaggccgtccaagcgaaggcgaaaccctg
attgcgcgtctgattgaccgcccggttcgtccgctgttcccggaaggcttcgttaacgaa
gtgcaggttatcgcgaccgtcgtttccgttaacccgcaggttaacccggacatcgttgcc
atgatcggcgcatccgctgcgctgtcgctgtccggcattccgttcaacggcccaatcggc
gcggcgcgcgtaggttacatcaatgaccagtacgtgctgaacccgacccaggacgagctg
aaagaaagcaagctggacctggtggttgccggtaccgaagcggctgtgctgatggtggaa
tccgaagctgaactgctgagcgaagacactatgctgggcgcggtggtattcggtcacgag
cagcagcaggttgttatccaggcgatcaacgatctggtgaaagaagccggtaaaccgcgt
tgggactggcagccggaagccgtcaacgacgcgttgaacgcgcgtgttgctgcgcttgct
gaatctcgtctgagcgacgcgtaccgcatcaccgataaacaagaacgctatgctcaggtt
gacgtaatcaaatccgaaaccatcgagcagcttattgcagaagatgaaactctggatgct
aacgagctgggcgaaatcctgcacgccatcgagaaaaacgtggtgcgtagccgcgtactg
gcaggcgagccgcgtattgatggccgtgaaaaagacatgatccgtggtctggacgtgcgc
actggcgtactgccgcgtactcacggttccgctctgtttacccgtggtgaaacgcaggcg
ctggttaccgcgactctgggtactgcccgtgacgcgcaggtgcttgatgaactgatgggc
gagcgcactgacagcttcctgttccactacaacttccctccgtactccgtaggcgaaacc
ggcatggtcggttctccgaagcgtcgtgaaattggtcacggtcgtctggcgaagcgcggc
gtgctggcagtgatgccggacatggataaattcccgtacaccgttcgcgtggtgtctgaa
atcaccgaatccaacggttcttcctctatggcttccgtgtgcggcgcttctctggcgctg
atggacgctggcgtgccaattaaagccgccgtagcaggtatcgctatgggtctggtgaaa
gaaggcgacaactacgttgtactgtctgacattctgggcgacgaagatcacctgggcgat
atggacttcaaagtggcgggttcccgcgacggtatctctgcgctgcagatggatatcaaa
attgaaggtatcaccaaagagatcatgcaggttgcgttgaaccaggctaaaggtgcgcgt
ctgcacatcctgggcgtgatggaacaggcgatcaacgcgccgcgcggcgatatctctgaa
tttgcgccgcgtatccataccatcaagatcagcacggacaagatcaaagacgtgatcggt
aaaggcggttctgtgatccgcgcgctgactgaagagaccggcaccaccatcgaaatcgaa
gatgacggtactgtgaagatcgcggcgaccgacggtgaaaaagcgaaatacgctatccgt
cgtatcgaagagattaccgcagagatcgaagtcggccgtatctacaatggtaaagtgacc
cgtatcgttgactttggcgcgtttgttgccatcggcggcggtaaagaaggtctggttcac
atctctcaaatcgcggataagcgtgtagagaaagtgaccgattatctgcagatgggtcag
gaagtcccggttaaggttctggaagttgaccgccagggccgtgtacgtctgagcattaaa
gaagcaaccgagcagtctcaacctgcggctgcgccggaagctccggcgagcgaacaggcc
gagtaa
DBGET
integrated database retrieval system
