Salmonella enterica subsp. enterica serovar Paratyphi B: SPAB_04625
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Entry
SPAB_04625 CDS
T00628
Name
(GenBank) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
spq
Salmonella enterica subsp. enterica serovar Paratyphi B
Pathway
spq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SPAB_04625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spq03400
]
SPAB_04625
Enzymes [BR:
spq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SPAB_04625
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SPAB_04625
DNA repair and recombination proteins [BR:
spq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SPAB_04625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
zf-dskA_traR
Motif
Other DBs
NCBI-ProteinID:
ABX69938
UniProt:
A9MVN0
LinkDB
All DBs
Position
complement(3870078..3870887)
Genome browser
AA seq
269 aa
AA seq
DB search
MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIYRLSDTPVLSVQRRAKYLL
LELPDGWIIIHLGMSGSLRILSEALPAEKHDHVDLVMSNGKILRYTDPRRFGAWLWTKEL
EGHNVLAHLGPEPLSDEFNGEYLQQKCAKKKTAIKPWLMDNKLVVGVGNIYASESLFAAG
IHPDRLASSLSTEECDLLARVIKAVLLRSIEQGGTTLKDFLQGDGKPGYFAQELQVYGRK
GEPCRVCGTPIAATKHAQRATFYCRHCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacccgaagttgaaaccagccgccggggtattgaaccccatttagttggc
gctactatcctgcacgcccatatccgtaacggccgtctgcgctggccggtttcagatgaa
atttatcgtctgagcgatacacccgtccttagcgttcagcgtcgtgctaaatatctactg
ctggagctgcctgacggctggataattattcacctggggatgtcgggaagcttgcggata
ctgtcggaagcgctgccggcggaaaagcacgaccatgtcgatttggtgatgagcaacggc
aaaattctacgttataccgatcctcgccgctttggcgcctggttatggaccaaagagctg
gaagggcataacgtactggcgcatctgggaccggagccgctaagcgatgagtttaatggc
gaatatttgcagcagaaatgcgcgaagaagaagacggcgattaaaccctggctgatggat
aacaagctggtggtcggcgtggggaatatctacgccagcgagtcgctgtttgccgctggt
attcaccctgaccgcctggcgtcgtcactctcgacagaggagtgcgacctgctggcgcgg
gtgattaaagccgttttgctgcgctctattgaacaaggcgggacaacgctgaaggatttt
ctgcaaggcgatgggaaaccgggctattttgcgcaggagttgcaggtgtacgggcgcaaa
ggcgagccgtgtcgggtatgcggtacgccgatagccgcaacgaaacacgcacagcgtgcg
acgttctattgccgtcactgtcagaagtaa
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