KEGG   Salmonella enterica subsp. enterica serovar Paratyphi B: SPAB_04860
Entry
SPAB_04860        CDS       T00628                                 
Name
(GenBank) hypothetical protein
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
spq  Salmonella enterica subsp. enterica serovar Paratyphi B
Pathway
spq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:spq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SPAB_04860
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spq03019]
    SPAB_04860
Enzymes [BR:spq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     SPAB_04860
Messenger RNA biogenesis [BR:spq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     SPAB_04860
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CCDC138_C ERCC3_RAD25_C AAA_22
Other DBs
NCBI-ProteinID: ABX70164
UniProt: A9MXF3
LinkDB
Position
complement(4068216..4069481)
AA seq 421 aa
MSKTHLTEQKFSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKT
MAFLTSTFHYLLSHPAIDDRKVNQPRALIMAPTRELAVQIHADAEPLAQATGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPPAAQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILD
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEEYALNLPAIESYIGHSIPVSKYNPEALMNDLPKPLRLTRSRPGNGPRRAGAPRNRRRS
G
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgagcaaaacacatttaacagaacagaagttttccgacttcgccctgcacccacaggtg
gttgaagcccttgaaaaaaaagggttttataattgtacgcccattcaggcactggccctt
ccgctaacgctggcgggtcgtgacgttgcagggcaggcgcaaaccggtaccgggaaaacg
atggcgtttctgacgtcaacgtttcattatttactttctcatcccgcgatcgacgatcgc
aaggtgaaccagccgcgcgcgctgatcatggcgccgacgcgtgaattagccgtacaaatt
cacgcagacgcggagccgttggcgcaagcgacaggcttaaaattaggcctggcttacggc
ggcgatggttacgacaagcagcttaaagtgctggaaagcggcgttgatattcttattggt
acgacgggccgactgatcgactacgccaaacaaaatcacattaacctcggcgccattcag
gtcgtcgtactcgatgaagccgatcgcatgtacgatttgggctttattaaagatatccgc
tggctgttccgtcgtatgccgccggctgcgcagcgtctgaacatgttgttctccgccacc
ctgtcctatcgggttcgcgagctggcgtttgaacagatgaacaacgccgaatatgttgaa
gtggaaccggagcaaaagaccggccaccgcattaaagaagagcttttctacccctctaat
gaagagaaaatgcgtttactgcaaacgctgatcgaagaagagtggccggatcgcgccatt
attttcgccaacaccaagcatcgttgcgaagatatctggggacatctggcggcagatggc
catcgtgttggtctgctgaccggcgacgtcgcgcagaaaaagcgcctgcggattctggat
gagttcacccgcggcgatctggatattcttgtggcgaccgatgtcgcggcgcgcgggttg
catatccccgccgtaacgcacgtctttaactacgatctgccagacgattgtgaagactat
gttcaccgtatcggtcgtaccggtcgcgctggcgccagcgggcattccatcagcctggct
tgcgaagagtatgcgctgaatctgcccgccattgagagctatatcggccactcgattccg
gtcagcaaatacaatccggaagcgctcatgaacgatctgcccaagccgttgcgcctgacg
cgttcgcgtcctggcaatggtccgcgccgcgctggcgctccgcgtaatcgtcgtcgttca
ggttaa

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