Salmonella enterica subsp. enterica serovar Paratyphi B: SPAB_04960
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Entry
SPAB_04960 CDS
T00628
Name
(GenBank) hypothetical protein
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
spq
Salmonella enterica subsp. enterica serovar Paratyphi B
Pathway
spq03030
DNA replication
spq03410
Base excision repair
spq03420
Nucleotide excision repair
spq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPAB_04960
03410 Base excision repair
SPAB_04960
03420 Nucleotide excision repair
SPAB_04960
03440 Homologous recombination
SPAB_04960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spq03032
]
SPAB_04960
03400 DNA repair and recombination proteins [BR:
spq03400
]
SPAB_04960
Enzymes [BR:
spq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SPAB_04960
DNA replication proteins [BR:
spq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SPAB_04960
DNA repair and recombination proteins [BR:
spq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SPAB_04960
NER (nucleotide excision repair)
GGR (global genome repair) factors
SPAB_04960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ABX70254
UniProt:
A0A3Z1E8Y1
LinkDB
All DBs
Position
4151474..4154260
Genome browser
AA seq
928 aa
AA seq
DB search
MVQIPENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYQPTHAAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT
LAREAEKVGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPDEVVNKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAGLTFRGAKTMAGKLAQNK
DVAYLSYKLATIKTDVELELTCEQLEVQQPIADELLGLFKKYEFKRWTADVESGKWLQAK
GAKPAAKPQETVVIDESPSEPAAALSYENYVTILDDVTLESWIEKLKKAPVFAFDTETDS
LDNIAANLVGLSFAIEPGVAAYVPVAHDYLDAPDQISRQRALELLKPLLEDEKVRKVGQN
LKYDRGVLQNYGIELRGIAFDTMLESYILNSVAGRHDMDSLSDRWLKHKTITFEDIAGKG
KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPELQQHKGPLNVFENIEMPLVPVLSRV
ERNGVKIDPAVLHKHSEEITLRLAELEKKAHDIAGEAFNLSSTKQLQTILFEKQGIKPLK
KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH
QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYLIVSADYSQIELRIMAHLSRD
KGLLTAFAEGKDIHRATAAEVFGLPLDSVTGEQRRSAKAINFGLIYGMSAFGLSRQLNIP
RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLEGRRLYLPDIKSSNAARRAGAE
RAAINAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDLDAVAKRI
HQLMENCTRIDVPLLVEVGSGENWDQAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggttcagatcccagaaaacccacttattctcgtagatggctcatcctatctctatcgc
gcctatcatgcgtttccgccgttaaccaacagcgcgggagaacctacgggcgcaatgtat
ggtgtcctcaacatgttgcgcagcctgatcatgcagtatcagccgacgcatgctgcggtg
gtgtttgacgccaaaggaaaaaccttccgtgatgagctctttgaacactacaaatcgcat
cgtcctccaatgccggatgatcttcgtgcgcaaatagagccgttacatgccatggttaaa
gccatggggttacctctgctggcggtctctggcgtagaagcggatgacgttatcggtaca
ctggcgcgagaagcggagaaggtggggcgtccggtattaatcagcaccggcgataaagat
atggcacagttggtgacgccgaatattacgctgatcaacaccatgactaacaccatcctc
ggcccggatgaagtcgttaataagtacggcgtgccgcctgagctgattatcgactttctg
gcgctgatgggggactcctcggataatattccgggcgtaccaggcgtgggtgagaagacg
gcgcaagccttgcttcagggattgggcggcctggatacgctgtacgccgagccggaaaaa
attgccggtctcactttccgcggcgccaaaacgatggccggtaaattagcgcagaataaa
gacgtagcgtacctgtcttataaactcgccaccattaaaacggatgttgagctggagctg
acctgcgaacagcttgaagtgcagcagccgattgcggatgaactgctgggcctgtttaaa
aaatatgagtttaagcgctggacggcggacgttgagtcaggcaagtggctacaggcaaag
ggcgcgaaaccggcggccaaaccgcaggaaacggtcgttattgatgaatcgcccagcgaa
ccggcagcggcgctctcttatgaaaattatgtcacgattctggacgacgttacgctggaa
agctggattgaaaagctgaaaaaagcgccagtttttgctttcgacacggagaccgacagc
ctggataatatcgccgccaacctggtgggcctctcgtttgccatcgaacctggcgttgcc
gcgtatgtacctgtcgcgcatgattatctggacgctccggatcaaatctcccgccagcgt
gctctggaactgctgaagccgctgctggaagatgaaaaagtgcgcaaagtggggcaaaac
ctcaagtacgatcgcggcgtcttgcaaaattacggtattgagctgcgcggtatcgccttc
gataccatgcttgagtcttacattctgaacagcgtcgccggacgccatgatatggacagt
ttgtccgatcgttggctgaagcacaaaactatcacctttgaagacattgccggtaaaggt
aaaaaccagctcacctttaaccagatcgcactggaggaagcggggcgctatgcggcagaa
gatgcggatgtcacgttacagttgcatctcaaaatgtggcctgagctccagcagcacaaa
ggcccgctgaatgttttcgaaaacatcgaaatgccgttggtgcctgtactgtcacgcgtt
gagcgcaatggcgtaaaaatcgatcctgccgtcctgcacaaacattcggaagaaatcacg
ctacgtctggcggaactggaaaagaaagcgcatgacattgcgggcgaggcgttcaacctg
tcctcgacgaagcagttgcagaccatcctgtttgaaaagcagggtattaagccgctgaag
aaaacgcctggcggcgcgccgtcaacgtcggaagaggtgctggaagagctggcgctggac
tatccgctgccgaaagtgattctggagtatcgtggtctggcgaagctaaaatccacctat
accgataagctgccgctgatgattaacccgaaaaccgggcgcgtccatacgtcctatcat
caggcggtaacggcgacgggacgtttatcgtccaccgatccgaacctgcaaaatattccg
gtgcgcaatgaagaaggccgccgcattcgtcaggcatttattgcgcctgaggattatctc
atcgtgtctgcggactattcacagattgagctgcgtattatggcgcatctttcccgtgat
aaaggactgctcacggcgttcgccgaagggaaggatattcaccgcgcaacggcggcggaa
gtctttggcttgccgctggatagcgtgaccggggaacagcgccgaagtgcgaaagccatt
aactttggcctgatttacgggatgagcgccttcggtctttctcgccagcttaatattccg
cgtaaagaggcgcagaagtatatggatctctacttcgaacgctaccctggcgtgctggaa
tatatggagcgcacccgcgctcaggcaaaagaacaaggctatgtggaaacgctggagggg
cgccgcctttacctgccggatattaaatccagcaacgcggcgcggcgcgcgggggcggaa
cgcgcggcgatcaatgctcccatgcaaggaacggctgccgatatcatcaagcgcgccatg
attgccgtcgatgcgtggctacaggccgagcagccacgcgtgcggatgattatgcaggta
cacgatgaattagtgttcgaggtgcataaagacgacttagatgcggtagcaaaacgtatc
catcagttgatggaaaactgcacgcgtattgatgtgccgttgctggtggaagtcggtagc
ggagaaaattgggatcaagcgcactaa
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integrated database retrieval system
