KEGG   Streptococcus pneumoniae R6 (avirulent serotype 2): spr0171
Entry
spr0171           CDS       T00060                                 
Symbol
uvrA
Name
(GenBank) Excinuclease ABC - subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
spr  Streptococcus pneumoniae R6 (avirulent serotype 2)
Pathway
spr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:spr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    spr0171 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spr03400]
    spr0171 (uvrA)
DNA repair and recombination proteins [BR:spr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     spr0171 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      spr0171 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 nSTAND1 AAA_29 RsgA_GTPase AAA_21 AAA_22 AAA_23 AAA_33 nSTAND3 Viral_helicase1 AAA_18 MMR_HSR1 NACHT ATPase AAA_14 DnaJ_CXXCXGXG cobW AAA_24 NB-ARC Septin T2SSE IIGP MeaB BCA_ABC_TP_C PRK DUF463 NTPase_1 YobI-ATPase DUF87 Dynamin_N
Other DBs
NCBI-ProteinID: AAK98975
UniProt: P63385
LinkDB
Position
179215..182046
AA seq 943 aa
MQDKIVIHGARAHNLKNIDVEIPRDKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSA
YARQFLGNMEKPDVDAIDGLSPAISIDQKTTSKNPRSTVGTTTEINDYLRLLYARVGTPY
CINGHGAINASSVEQIVDKVLELPERQRLQILAPVIRKKKGQHKSVIEKVQKDGYVRVRV
DGEVYDVTEVPELSKSKQHNIDVVVDRIVIKEGIRSRLFDSIEAALRIAEGYVIIDTMDD
SELLFSEHYACPVCGFTVPELEPRLFSFNAPFGSCSECDGLGIKLEVDTDLVVPDASKTL
REGALAPWNPISSNYYPNMLEQAMKVFGVAMDKPFEDLSEEDKNLILYGSDGKEFHFHYE
NEFGGVRDIDIPFEGVINNIKRRYHETNSDYTRTQMRLYMNELTCGTCQGYRLNDQALSV
RVGGQQGPHIGEISDLSIADHLDLVSQLTLSENEAIIARPILKEIKDRLTFLNNVGLNYL
TLSRSAGTLSGGESQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIASLKKMRDLG
NTLIVVEHDEDTMREADYLIDVGPGAGVFGGEIVAAGTPKQVARNSKSITGQYLSGKRVI
PVPEERRVGNGRFIEVIGARENNLQNVTARFPLGKFIAVTGVSGSGKSTLINSILKKAIA
QKLNRNSDKPGKFKTITGIEHVDRLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAQTNE
AKIRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVYVACEVCHGTRYNSETLEVHY
KEKNISQVLDMTVNDAVEFFQHIPKIQRKLQTIKDVGLGYVTLGQPATTLSGGEAQRMKL
ASELHKRSTGKSFYILDEPTTGLHTEDIARLLKVLARFVDDGNTVLVIEHNLDVIKTADH
IIDLGPEGGVGGGTIIVTGTPEEVAANEASYTGHYLKGKLHHE
NT seq 2832 nt   +upstreamnt  +downstreamnt
atgcaagataaaattgtcattcatggggcgcgtgcccataatttaaaaaatattgatgtg
gagattccgcgagacaagttggttgtcgtgactggcttgtcaggttcagggaagtccagt
ctggcttttgatactctctatgcggagggacaacgtcgctatgtagagagtttgtccgcc
tacgctcgtcagttcttgggaaatatggaaaaaccagatgtagatgccattgatggtctc
agcccagctatttccatcgaccagaaaacgactagtaaaaatcctcgctcgacggtggga
acaacgactgaaatcaatgactatctgcgtctcctctacgcacgtgtggggacgccttac
tgtatcaacggacatggagctatcaatgcttcttctgtggagcaaatcgttgataaggtt
ttggagttacctgaacgccagcgcttgcagatcttggctcctgtcatccgcaagaaaaaa
ggccaacataagagtgttatcgagaaggttcagaaagacgggtatgttcgtgtccgtgtg
gatggggaagtctatgatgtgaccgaagtgccagagttgtctaagagcaagcaacacaat
atcgatgtcgtggttgaccgtattgttatcaaggagggcattcgtagtcgtctctttgat
tccattgaggctgcccttcgtattgcagaaggttatgtcattatcgacaccatggacgac
tctgagttgttgttctctgagcattatgcctgtccagtttgtggttttactgtcccagag
ttagagcctcgtctcttttctttcaatgctccttttggctcttgtagtgagtgtgacggc
ttgggcatcaagctggaggtggatactgatttggtagtgccagatgctagcaaaacctta
cgtgagggagcgctagcaccttggaatcctatctcatccaactactatccaaacatgtta
gagcaggccatgaaagtctttggagtggctatggataagccttttgaggacctgtcagaa
gaagataagaacttgattctctatgggtcagatggtaaggaattccatttccactatgag
aatgaatttggtggcgtgcgcgatatcgacattccgtttgagggagttatcaataatatc
aaacgtcgttaccatgaaaccaatagcgattacactcgcactcagatgcgtctctacatg
aatgagctgacctgcggaacctgtcaaggctatcgtctcaatgaccaggccttgtctgtc
cgtgtgggcggccagcaagggccacatattggagaaatctcagacctgtctatcgctgac
cacttggacttggtgagccagttaactttgtctgaaaatgaagccatcattgctcgtccc
attctcaaggaaatcaaggatcgtttgaccttccttaataatgtgggtcttaactatcta
accctgtcacgttcagcaggaaccctttcaggtggggaaagtcagcgcattcgtttggca
acccagattggttccaacctatcaggcgtcctctatatcctagacgagccgtcaatcggt
cttcaccagagggacaatgaccgcctgattgccagtctgaaaaagatgcgtgacttgggc
aatactcttatcgtggtggaacacgacgaagataccatgcgtgaagctgattatctgatt
gacgttggtcctggtgccggtgtttttggtggtgagattgttgcagcaggtacacctaag
caagtggctcgcaacagcaagtctatcacaggtcagtacttgtcaggcaaacgtgtcatc
ccagtaccagaagagcgccgtgtcggaaatggtcgttttattgaagtgataggagcgcgt
gagaacaacttgcaaaatgtcacggctcgctttccactaggaaaatttatcgcagtgaca
ggtgtgtcgggttcagggaaatcgactctaatcaacagcattctcaaaaaagccattgcc
cagaagctcaaccgtaattcagacaaacctggtaagtttaagactattacagggattgag
catgtcgaccgtttgattgatattgaccagagccctatcggacggacgccgaggtctaac
ccagctacctatacaggagtttttgacgatatacgtgacctttttgctcagacaaatgaa
gccaagattcgaggctacaagaaggggcgcttcagtttcaacgtcaagggaggtcgctgt
gaagcttgctcaggtgacgggattatcaagattgagatgcacttcttgccagatgtttat
gtggcttgtgaagtttgccacggaacccgctataacagtgaaaccctagaagttcactac
aaggaaaagaatatttcgcaggtcttggatatgacggtcaacgatgcggtagaatttttc
caacacattccgaaaattcaacgcaaactccagaccatcaaggatgtagggctaggctat
gtgaccttgggacagccagctaccaccctttctgggggagaagcccaacgtatgaagtta
gctagcgaactccacaaacgctcgacaggaaaatctttctacattctggatgagccgacg
acagggcttcatacagaggacattgctcgcctgctcaaggttttagctcgctttgtagac
gatggcaatacagtcctcgtcatcgagcacaatctggatgttatcaagacggcagaccat
atcattgacttgggacctgagggcggtgtcggtggtggaaccatcatcgtaacaggaact
ccagaagaagtagctgccaacgaagccagctatacaggacactatttgaaaggaaagtta
catcatgaataa

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