Streptococcus pneumoniae R6 (avirulent serotype 2): spr0537
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Entry
spr0537 CDS
T00060
Symbol
recJ
Name
(GenBank) Single-stranded DNA-specific exonuclease, 5'-3'
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
spr
Streptococcus pneumoniae R6 (avirulent serotype 2)
Pathway
spr03410
Base excision repair
spr03430
Mismatch repair
spr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
spr0537 (recJ)
03430 Mismatch repair
spr0537 (recJ)
03440 Homologous recombination
spr0537 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spr03400
]
spr0537 (recJ)
DNA repair and recombination proteins [BR:
spr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
spr0537 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
spr0537 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
spr0537 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
YjeF_N
AlaDh_PNT_C
ThiG
DSPc
Motif
Other DBs
NCBI-ProteinID:
AAK99341
UniProt:
Q8DQR4
LinkDB
All DBs
Position
535289..537523
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AA seq
744 aa
AA seq
DB search
MDVFLITPTYEWQFALQVEDADFTKIAKKAGLGPEVARLLFERGIQDQESLKKFLEPSLE
DLHDAYLLHDMDKAVERIRQAIEEGENILVYGDYDADGMTSASIVKESLEQLGAECRVYL
PNRFTDGYGPNASVYKYFIEQEGISLIVTVDNGVAGHEAIALAQSMGVDVIVTDHHSMPE
TLPDAYAIVHPEHPDADYPFKYLAGCGVAFKLACALLEEVQVELLDLVAIGTIADMVSLT
DENRILVQYGLEMLGHTQRIGLQEMLDMAGIAANEVTEETVGFQIAPRLNALGRLDDPNP
AIDLLTGFDDEEAHEIALMIHQKNEERKEIVQSIYEEAKTMVDPEKKVQVLAKEGWNPGV
LGIVAGRLLEELGQTVIVLNIEDGRAKGSARSVEAVDIFEALDPHRDLFIAFGGHAGAAG
MTLEVEQLSDLSQVLEDYVREKGADAGGKNKLNLDEELDLEALSLETVKSFERLAPFGMD
NQKPIFYIKNFQVESARTMGAGNAHLKLKISKGEASFEVVAFGQGRWATEFSQTKNLELA
VKLSVNQWNGQTALQLMMVDARVEGVQLFNIRGKNAVLPEGVPVLDFPGELPNLAASEAV
VVKNIPEDITQLKTIFQEQHFSAVYFKNDIDKAYYLTGYGTRDQFAKLYKTIYQFPEFDI
RYKLKDLAAYLNIQQILLVKMIQVFEELGFVTIKDGVMTVNKEAPKREIGESQIYQNLKQ
TVKDQEMMALGTVQEIYDFLMEKE
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
gtggatgtctttttgataacacctacttatgaatggcagtttgccctgcaggtagaagat
gcggattttacaaagatagccaagaaggctggactgggtcctgaggtggctcggttattg
tttgagagagggattcaggaccaagaaagtctgaagaagtttttagaaccttccttggag
gacttacatgatgcttatctgctccatgatatggacaaggcagtggagcggattcgtcag
gctattgaagaaggggaaaatattctcgtttatggagactatgatgcggatggcatgact
tcggcttctattgtgaaggaaagtttggaacaacttggtgctgagtgccgagtttacctg
ccaaatcgttttaccgatggctatggccctaatgctagtgtttataaatactttatcgag
caagaaggaatttccttgattgtgacggtggacaatggggttgctggtcatgaggctatt
gcattggctcagtctatgggagtagatgtcattgtgacagaccatcattccatgcctgaa
accctgccagatgcttatgctattgtccatcctgaacatccagatgcggattatcctttt
aaatatttggctggttgtggagttgctttcaagttggcttgtgccctgttagaagaagtg
caagtggaattgcttgatttggtcgctattggaactattgcagatatggtgagtctgacg
gatgaaaatcgtatcttagttcaatatggtctggaaatgttgggtcatacccagcgcatt
ggtctgcaagaaatgctggacatggctgggattgctgccaacgaagtaacagaagaaacg
gttggtttccagattgctcctcgtttgaatgccttgggtcgcttggatgatcccaatcct
gccattgatttgttgactggatttgatgatgaggaagcgcatgagattgcccttatgatt
caccagaaaaacgaagagcgcaaggaaatcgttcagtctatctatgaagaagccaagacc
atggtggatcctgagaagaaggttcaggtcttggccaaggaaggctggaatcctggggtt
ctaggaatcgtggctggtcgtttattggaagaattgggacagacagtcattgttcttaat
atagaagacggtcgtgccaagggcagtgctcgtagtgtggaagcggtcgatatttttgaa
gctctggatccccatcgagacctcttcatcgcctttggaggtcatgcaggtgcagcgggt
atgacgctggaagttgagcaactctcagatttatctcaggttttggaagattatgttcgt
gaaaaaggtgcagatgctggtggcaagaataagttaaacctagatgaagagttggatttg
gaggcacttagcttggaaacggtcaaaagttttgaacgtttagctccttttggaatggat
aatcagaaacctattttttatatcaagaattttcaggtcgaaagtgctcgtactatgggg
gcaggtaatgcccatctaaagctgaaaatttccaagggtgaggcgagttttgaagtggta
gcctttggtcaaggcagatgggcgacagagttttctcaaaccaagaatctagagttagcg
gttaaattgtctgtcaaccaatggaatggccaaactgctctccagttgatgatggtggat
gcgcgagtggaaggtgttcaactttttaacattcgtggaaaaaatgcagtcttgccagaa
ggtgttccagtcttggattttcctggagaactgccaaatcttgcggctagtgaagctgtt
gtcgtaaaaaacattccagaggatattactcagctgaagaccatttttcaggaacagcat
ttctctgctgtctatttcaaaaatgatattgacaaggcttattatctgacaggttatggg
actagagatcagtttgccaaattgtacaagactatttaccagttcccagagtttgatatt
cgctacaagctgaaagatttggctgcatatcttaatattcaacaaatcttgctggtcaag
atgattcaagtatttgaagaactaggctttgtgacgataaaagatggtgtgatgacagtc
aataaagaggcgccaaagcgggagataggagaaagtcaaatttaccaaaatctcaaacaa
accgttaaagaccaagaaatgatggcgctgggtacggtgcaagaaatttatgattttttg
atggaaaaagagtag
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