Streptococcus pneumoniae R6 (avirulent serotype 2): spr0670
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Entry
spr0670 CDS
T00060
Symbol
rheB
Name
(GenBank) ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
spr
Streptococcus pneumoniae R6 (avirulent serotype 2)
Brite
KEGG Orthology (KO) [BR:
spr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spr03019
]
spr0670 (rheB)
03009 Ribosome biogenesis [BR:
spr03009
]
spr0670 (rheB)
Enzymes [BR:
spr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
spr0670 (rheB)
Messenger RNA biogenesis [BR:
spr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
spr0670 (rheB)
Ribosome biogenesis [BR:
spr03009
]
Prokaryotic type
rRNA helicases
spr0670 (rheB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AAK99474
UniProt:
Q8DQH1
LinkDB
All DBs
Position
674561..675904
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AA seq
447 aa
AA seq
DB search
MSFTKFQFKNYIREALKELKFTTPTEVQDKLIPIVLAGRDLVGESKTGSGKTHTFLLPIF
QQLDEASDSVQAVITAPSRELATQIYQVARQISAHSDVEVRVVNYVGGTDKARQIEKLES
NQPHIVIGTPGRIYDLVKSGDLAIHKAKTFVVDEADMTLDMGFLETVDKIAGSLPKDLQF
MVFSATIPQKLQPFLKKYLSNPVMEKIKTKTVISDTIDNWLISTKGHDKNAQIYQLTQLM
QPYLAMIFVNTKTRADELHSYLTAQGLKVAKIHGDIAPRERKRIMNQVQNLDFEYIVATD
LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLPGTAITLYQPSDDSDIRELEKL
GIKFSPKMVKDGEFQDTYDRDRRANREKKQDKLDIEMIGLVKKKKKKVKPGYKKKIQWAV
DEKRRKTKRAENRARGRAERKAKRQTF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttacgaaatttcaatttaaaaactatattagagaagccttgaaggagttaaaa
tttacaactccaacagaggtgcaagacaagttgattcctattgttttggcaggtcgtgac
ctagtaggagaatcaaaaacaggttcaggtaagactcacactttcttgttaccgattttc
cagcaattagatgaagctagcgatagtgtacaagcagtgattactgcaccgagtcgtgag
ttggctactcaaatttaccaagtagcgcgtcagatttcagctcactcagatgtcgaagtt
cgtgtggttaattatgtgggtggtacggataaggctcgccagattgagaaattggaaagc
aatcagcctcatattgttattggaacaccaggccgtatctacgacttggttaaatctggt
gatttagctattcataaagccaagacatttgttgttgatgaagcagatatgaccttggat
atgggattcttggaaactgttgataagattgctggcagtcttccaaaagacttgcaattc
atggtcttctcagcgactatcccacaaaaactgcaaccattcttgaaaaaatacttatca
aatcctgttatggagaaaattaagactaaaacggttatttctgacaccattgataattgg
ttgatttcgaccaagggacatgataagaatgctcaaatttaccagttgactcagttgatg
cagccgtatttggcaatgatttttgttaacactaaaacgcgtgctgatgaattgcattca
tatctgactgctcaaggcttgaaggttgcaaaaatccatggcgatattgcccctcgtgaa
cgcaagcgaatcatgaatcaggtgcaaaatctggattttgagtatattgtcgcaacagat
ttagcagcgcgtgggattgacattgaaggtgtcagccatgtcatcaatgatgccattccg
caagacttatctttttttgttcaccgtgttggtcgtactggacgaaatggcctaccaggt
acagctattaccctttatcagccaagtgatgactcggatatccgtgagttggagaaattg
ggaatcaagtttagtcctaagatggtcaaagatggggaatttcaagatacctatgaccgt
gatcgtcgtgccaaccgtgagaaaaaacaagataaacttgatatcgaaatgattggtttg
gttaaaaagaaaaagaaaaaagtcaaaccgggttataagaagaaaattcaatgggcggtt
gatgaaaagcgccgtaaaactaagcgtgctgaaaatcgcgctcgcggtcgtgcagagcgt
aaagctaaacgccaaacattttaa
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