Streptococcus pneumoniae R6 (avirulent serotype 2): spr0795
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Entry
spr0795 CDS
T00060
Symbol
dnaE
Name
(GenBank) DNA-polymerase III alpha-chain
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
spr
Streptococcus pneumoniae R6 (avirulent serotype 2)
Pathway
spr03030
DNA replication
spr03430
Mismatch repair
spr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
spr0795 (dnaE)
03430 Mismatch repair
spr0795 (dnaE)
03440 Homologous recombination
spr0795 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spr03032
]
spr0795 (dnaE)
03400 DNA repair and recombination proteins [BR:
spr03400
]
spr0795 (dnaE)
Enzymes [BR:
spr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
spr0795 (dnaE)
DNA replication proteins [BR:
spr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
spr0795 (dnaE)
DNA repair and recombination proteins [BR:
spr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
spr0795 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
SSB
Motif
Other DBs
NCBI-ProteinID:
AAK99599
UniProt:
Q8DQ86
LinkDB
All DBs
Position
795966..799094
Genome browser
AA seq
1042 aa
AA seq
DB search
MRRIEEKCKLIAQLDTKTVYSFMESVISIEKYVRAAKEYGYTHLAMMDIDNLYGAFDFLE
ITKKYGIHPLLGLEMTVFVDDQEVNLRFLALSSVGYQQLMKLSTAKMQGEKTWSVLSQYL
EDIAVIVPYFDRVESLELGCDYYIGVYPETLASEFHHPILPLYRVNAFESRDREVLQVLT
AIKENLPLREVPLRSRQDVFISASSLEKLFQECFPQALDNLEKLISGISYDLDTSLKLPR
FNPARPAVEELRERAELGLVQKGLTSKEYQDRLDQELSVIHDMGFDDYFLVVWDLLRFGR
SNGYYMGMGRGSAVGSLVSYALDITGIDPVEKNLIFERFLNRERYTMPDIDIDIPDIYRP
DFIRYVGNKYGSKHAAQIVTFSTFGAKQALRDVLKRFGVPEYELSAITKKISFRDNLKSA
YEGNLQFRQQINSKLEYQKAFEIACKIEGYPRQTSVHAAGVVISDQDLTNYIPLKYGDEI
PLTQYDAHGVEASGLLKMDFLGLRNLTFVQKMQELLAEIEGIHLKIEEIDLEDKETLALF
ASGNTKGIFQFEQPGAIRLLKRVQPVCFEDVVATTSLNRPGASDYINNFVARKHGQEEVT
VLDPVLEDILAPTYGIMLYQEQVMQVAQRFAGFSLGKADILRRAMGKKDASAMHEMRASF
IQGSLEAGHTVEKAEQVFDVMEKFAGYGFNRSHAYAYSALAFQLAYFKTHYPAIFYQVML
NSSNSDYLIDALEAGFEVASLSINTIPYHDKIANKAIYLGLKSIKGVSNDLALWIIENRP
YSNIEDFIAKLPENYLKLPLLEPLVKVGLFDSFEKNRQKVFNNLANLFEFVKELGSLFGD
AIYSWQESEDWTEQEKFYMEQELLGIGVSKHPLQAIASKAIYPITPIGNLSENSYAIILV
EVQKIKVIRTKKGENMAFLQADDSKKKLDVTLFSDLYRQVGQEIKEGAFYYVKGKIQSRD
GRLQMIAQEIREAVAERFWIQVKNHESDQEISRILEQFKGPIPVIIRYEEEQKTIVSPHH
FVAKSNELEEKLNEIVMKTIYR
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
gtgagaaggatagaggagaagtgtaaattgatcgcacaactagatacaaaaacagtctat
agttttatggaaagcgtcatttcgatcgaaaagtatgtgagagcagctaaagaatacggc
tacactcatttggctatgatggatattgacaatctttatggcgctttcgactttctagag
attacaaaaaaatacggcattcatcctttgctagggcttgaaatgacagtgtttgtagat
gatcaggaagtgaatttgcgctttttagctctatctagtgtgggctatcagcagttgatg
aagctttcgacagccaagatgcagggggagaaaacttggtcagtcctgtcccagtacctg
gaggatatcgcggtcattgtgccttattttgatagagttgagtcgttagaactaggctgt
gattactatataggggtttatccagaaacactagcaagcgaatttcatcatcctatctta
cctctttatcgggtcaacgcttttgaaagcagggatagagaagttcttcaagttttaaca
gcgattaaagaaaatctaccgctcagagaagttcccttgcgttcgagacaagatgtcttt
atatcagcaagttctttagagaaactattccaagagtgttttccgcaagctttggacaat
ttagaaaagcttatttcaggcatttcttacgacttggatactagtctgaaactgcctcgt
tttaatccagctagaccagcagtagaggagttgagagagcgtgctgaactggggcttgtt
cagaaggggttgactagtaaagaatatcaagatagactagaccaagaattgtctgttatt
catgatatgggctttgatgattatttcttggttgtttgggatttgttgcgttttggacga
tcgaatggctattatatgggaatgggaaggggttctgcagtaggcagtttggtttcttat
gccttagacatcacggggattgacccagtagagaaaaatctgatttttgaacgctttctt
aatcgtgaacgctataccatgcctgatattgatattgatatcccagatatttatcgtcca
gattttatcagatatgttggtaataaatatggtagtaaacatgcggcacaaatcgttact
ttttcaacctttggagccaagcaagctcttcgagatgtcttgaaacgctttggtgtgcca
gagtatgaattatctgcaattactaagaaaatcagttttcgtgacaatcttaagtcggcc
tatgagggcaatctccagtttcgtcagcaaatcaatagtaagttagaataccaaaaagct
tttgagattgcttgcaagatagagggctatccaagacaaacctctgtccatgcggctggt
gttgtaattagtgaccaagatttaaccaactatattcctctaaagtatggtgatgaaatt
ccactgactcagtatgatgctcatggagttgaggctagcggacttttgaagatggacttt
ctgggactacgaaatttgacctttgttcagaagatgcaagagttgcttgctgaaatagaa
ggtattcaccttaaaattgaagaaatagatttggaagacaaagaaacgttagctttattt
gcctctggaaatacaaaaggtatctttcaatttgagcaaccaggtgccattcgtctgctt
aagcgtgtgcaaccagtctgttttgaagatgtcgtcgcgactacttctctaaatcgaccg
ggtgctagtgactatatcaataattttgtggcaagaaagcatgggcaggaagaagtgact
gttctggatccagtactggaggatattttggctccaacctacggcataatgctctatcag
gagcaggttatgcaggttgcccagcgatttgccggatttagtcttgggaaagccgatatt
ttgcgtcgggctatggggaaaaaggatgcctctgccatgcatgagatgagggcttccttt
attcaaggttcattagaagctggtcatactgtggaaaaagcagagcaggtctttgatgtt
atggagaagtttgcaggttatggttttaacaggtcacacgcctatgcctactcagccttg
gccttccagttggcttattttaaaacacattatccagccattttttatcaggtcatgtta
aattcttccaacagtgattacttaatagatgcacttgaagcaggttttgaagtagcctct
ctatccatcaacaccattccctatcacgataaaattgccaacaaggccatctatctaggt
ttgaaatccattaaaggagtcagtaatgatttagctctctggattattgaaaatagacct
tattctaacattgaagattttatagctaaattacctgagaattatctgaaacttcctctg
ctagaacctttggtaaaagttggtcttttcgattcatttgaaaaaaatcgtcaaaaagta
tttaataatttagctaatctatttgaatttgtgaaagagttgggaagtttgtttggagat
gctatttatagttggcaggaatcggaagattggacggaacaagaaaaattttatatggaa
caagagcttttagggataggtgtcagcaaacatccactacaagctattgcaagtaaggct
atttacccgattaccccaatcggaaatttgtcagaaaatagctatgctattatcttggtt
gaagttcagaaaataaaagtgattcgtaccaaaaagggtgaaaatatggccttcttacag
gcagatgatagtaagaaaaaattggatgtcactctcttttcagacttatatcgtcaggtt
ggacaggaaataaaagagggagccttctactatgtaaaaggaaaaatacaatcacgtgat
ggccgtctgcaaatgattgcacaagaaataagagaagcagttgctgaacgcttttggata
caggtgaaaaatcatgaatcggatcaagaaatttcacgcattttagaacaatttaaaggc
ccaatcccagtcatcatccggtatgaagaggaacagaaaaccatcgtttctccccatcat
tttgtagctaaatccaatgaattagaggagaaattgaatgaaatcgttatgaaaacgatt
tatcgctaa
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