Streptococcus pneumoniae R6 (avirulent serotype 2): spr0836
Help
Entry
spr0836 CDS
T00060
Symbol
holB
Name
(GenBank) DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
spr
Streptococcus pneumoniae R6 (avirulent serotype 2)
Pathway
spr03030
DNA replication
spr03430
Mismatch repair
spr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
spr0836 (holB)
03430 Mismatch repair
spr0836 (holB)
03440 Homologous recombination
spr0836 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spr03032
]
spr0836 (holB)
03400 DNA repair and recombination proteins [BR:
spr03400
]
spr0836 (holB)
Enzymes [BR:
spr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
spr0836 (holB)
DNA replication proteins [BR:
spr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
spr0836 (holB)
DNA repair and recombination proteins [BR:
spr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
spr0836 (holB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
Motif
Other DBs
NCBI-ProteinID:
AAK99640
UniProt:
Q8DQ57
LinkDB
All DBs
Position
836898..837788
Genome browser
AA seq
296 aa
AA seq
DB search
MKQDQLKAWQPAQFDRFVRILEQDQLNHAYLFSGFFGSLEMAQFLAKSLFCTDKVGVLPC
EKCRSCKLIEQEEFPDVTLIKPVNQVIKTERIRELVGQFSQAGIESQQQVFIIEQADKMH
PNAANSLLKVIEEPQSEVYIFFLTSDEEKMLPTIRSRTQIFHFKKQEEKLILLLEQMGLV
KKKATLLAKFSQSRAEAEKLAHQASFWTLVDESERLLTWLVAKKKESYLQVAKLANLADD
KEKQDQVLRILEVLCGQDLLQVRVRVILQDLLEARKMWQANVSFQNAMEYLVLKEI
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaagatcaactaaaggcttggcaaccagctcagtttgaccgttttgtccgtatc
ttagaacaagaccagctcaatcacgcctatctcttttcaggtttctttggaagcttggaa
atggcgcaatttttagctaagagccttttttgtacggataaagttggcgtcttaccatgt
gagaaatgccgaagttgcaagctgattgaacaggaagagtttccagatgtcaccttgatt
aagccagtcaatcaggtcatcaagacagaacgcattcgggaattggtgggacagttttct
caagcagggattgaaagccagcaacaggtctttatcatcgagcaagcggataaaatgcat
cccaacgcagccaattctctgctcaaggtcatcgaagaaccccagagtgaagtttatatt
ttcttcttgactagcgatgaggaaaagatgttaccgacaatccgaagtcggactcagatc
ttccactttaaaaagcaagaagaaaaacttatcttactcttagaacaaatgggacttgtt
aagaaaaaagcgactcttttagctaagtttagtcaatcgcgagctgaagcagaaaagttg
gcacatcaggcaagtttttggaccttggtcgatgaaagtgaacgcctgctgacttggtta
gtagctaagaaaaaagaaagttatctacaggttgccaaattagccaacttggcagatgat
aaggaaaaacaggatcaggttttacggattcttgaagttctctgtgggcaggacctcttg
caggtaagagtaagagtgattctacaagatttactagaagctagaaaaatgtggcaagct
aatgtcagctttcaaaatgccatggaatatctggtcttgaaagaaatataa
DBGET
integrated database retrieval system
