Streptococcus pneumoniae R6 (avirulent serotype 2): spr1375
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Entry
spr1375 CDS
T00060
Symbol
snf
Name
(GenBank) SWF/SNF family ATP-dependent RNA helicase
Organism
spr
Streptococcus pneumoniae R6 (avirulent serotype 2)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2_assoc
SNF2-rel_dom
Helicase_C
ResIII
SWIM
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
AAL00179
UniProt:
Q8DP39
LinkDB
All DBs
Position
complement(1356038..1359136)
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AA seq
1032 aa
AA seq
DB search
MAKLIPGKIRIEGVALYETGKVDIIKEKNNRLYARVAEEELRYSLEDDLVFCACDSFQKR
GYCVHLAALEHFLKNDERGQEILWSLEEGHEEKEAVETKVTLGGKFLDRILSPKSECAYE
LSAVGQVEAGTNHILWTLRIGQINSQKYYIIRDIPLFLRIVEQRKSYMIGKIYEESLSWE
AFDDASQELLTFLHGLTEEGLVPDLFFQNQGRHLFFPLTFFEQGVNLLMALPHFQFDHQV
DSYQTLLFQDMHADANLFAFAVTEYSDYFEMEISESPRVNVFYQGAVLFHKGQVYFLTDQ
QMRLLKEIKALPVGQQGKKYLQFDSSDRDKLASCLTLFIQMGTVSAPERLQIKTFAPSFY
FDREEDNRIRLEIQFDYGNRQVSSRQELEELPFSSDADLEERIFQVCLAAGFEADFQSWR
QALKAESVYHFFHDIIPVFEKLGHVDLSDKLEELYSLASPQVQIASKGGLLEIQFDFQNI
AQEEIDQAMQALVANQDFYIDSSNQVYFFDEETKKIRQNLQELGQFELKDGTLQARKSLA
YSLAHLFEGRDRVSFSQEFQNLAQDLTHPEDFPLQATQVKADLRDYQEKGIGWLQMLHHY
DFGGILADDMGLGKTLQTIAFLTSQVTKESRVLILAPSGLIYNWADEFQKFAPQLDVAVV
HGLKASREEILAESHQIYVTSYATFRQDSELYQGMAFDFLFLDEAQVMKNAQTKIAQTLR
QFVVPSVFALSGTPIENHLGELWSIFQIVMPGLLPSKKEFMKLPAERVAQFIKPFVMRRK
KEEVLTELPDLIEVVYKNELEDQQKAIYLAQLQQMRDHLAQVSEQEFQRSRVEILSGLMR
LRQICDTPALFMEDYQGASGKLDSLRDLLVQVADGGHRVLIFSQFKGMLEKIEQELPDLG
LTSFKITGSTPAKERQDMTKAFNQGERDAFLISLKAGGVGLNLTGADTVILVDLWWNPAV
EAQAIGRAHRMGQEETVEVYRLVTKGTIEEKIQELQEQKKHLVSQVLDGTESRGSLTLAE
IREILGISEAST
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggctaaattgattccggggaaaattcgtatcgaaggtgttgccctttatgaaactggt
aaggttgatatcatcaaggaaaagaacaatcggctctacgctcgcgttgcagaagaagaa
ctgcgctatagtttagaggatgatttggttttttgtgcctgtgattcttttcaaaagagg
ggctactgtgtgcatttggcagcgctagagcattttctgaaaaatgatgagcgtggtcag
gaaatcttgtggagtctggaagaaggtcatgaagaaaaagaggccgttgaaaccaaggtg
accttgggtggcaagtttttggatcgaattttatctccaaaatcagaatgcgcctatgag
ttatcagctgtgggtcaggtggaagcaggaaccaatcatatcttgtggactctgagaatc
ggccaaatcaatagccaaaaatactatatcattcgggatattccactttttttaaggatt
gtcgagcagagaaagtcgtatatgattggcaagatttatgaggagtctctttcttgggaa
gcctttgatgatgccagccaagaacttttgactttcttgcacggactaacggaggaaggg
ctggttccagacctctttttccaaaaccaaggtcggcacctctttttccctctgaccttt
tttgagcagggtgtgaatttactgatggccttgccccattttcaatttgaccatcaagtg
gatagctaccaaaccctgctttttcaggatatgcatgctgatgccaatctatttgccttt
gcagtaacagaatactcggattattttgaaatggaaatcagtgagagtcctagggtcaat
gtcttttatcagggagcagtacttttccataaaggtcaggtttattttttaacagaccag
cagatgcgtcttctcaaggaaattaaagcgttacctgtgggtcaacaaggaaagaaatac
ctgcaatttgatagcagtgatcgagacaaattggcctcctgtctgactctttttatccag
atgggcaccgtttcagctccagaacgtctacaaatcaaaacttttgcgccctctttttac
tttgacagggaagaagataatcggattcgtttagaaattcagtttgattatggaaataga
caggtatctagccgacaagagctagaagaattacccttttcaagtgacgcagacttagaa
gaaagaattttccaagtctgtttggctgcgggctttgaagccgattttcaatcttggcgt
caggccttaaaagcggagtctgtctatcatttttttcatgatatcattccagtctttgaa
aaactcgggcatgttgacctatcagataaactagaagagctttatagcctagcgagtcct
caggtgcagattgcctccaagggaggtctcttggaaatccagtttgattttcaaaatatt
gcccaggaggaaatcgaccaagccatgcaggccttggttgccaatcaggatttttatatt
gattcgtctaatcaagtttactttttcgatgaagaaaccaagaaaattcgccaaaatcta
caggaactggggcaatttgaattaaaagatgggaccttgcaggctcggaaatccttggcc
tacagtttagctcatctctttgaagggcgagaccgtgtttctttttcacaagaattccag
aatctggcccaggatttgacgcatccagaggactttcctttgcaagcaactcaggtcaag
gctgacttgcgagattatcaggaaaagggaattggctggttgcagatgctccatcattat
gattttggtgggattttggctgatgatatgggacttgggaaaacccttcagaccattgct
tttttgactagtcaagtgacaaaagaaagtcgggttttgattctcgctccgtcgggtttg
atttacaactgggcagatgagtttcagaaatttgctccacagttggatgtggctgttgtt
catggtttgaaagcaagtcgtgaggagattcttgccgagagccatcaaatctatgtgact
agctatgccaccttccgtcaggacagtgagctttatcaggggatggcctttgacttcctt
ttcttagatgaagctcaggtcatgaaaaatgcccagaccaagattgcccagaccttgaga
caatttgtggtgccgtcggtctttgccttgtcaggaactccgattgaaaaccatctgggt
gagttgtggtctatttttcaaatcgtcatgcccggacttttgccaagcaagaaagaattt
atgaaattgccagcagagcgagtggctcagtttatcaagcctttcgtgatgcgacgcaag
aaagaagaagttctgactgaattgccagacttgattgaggtggtttataaaaatgaactg
gaagaccagcaaaaggctatttaccttgcccagttacaacagatgcgagaccatctggct
caagtgtcagaacaggaatttcagcgaagtcgtgtggaaattttatctggtttgatgcgc
ttgcgtcaaatatgtgacactcctgccctgtttatggaagattatcagggagccagcggc
aaactagatagtctccgagacctactggtacaggtggcagacggcggacaccgtgtcttg
attttctctcagttcaagggaatgttggaaaaaattgaacaagaactgccagacttgggc
ctgacttcctttaaaattacgggttcaaccccagccaaggaaagacaagacatgaccaag
gcctttaatcaaggagaaagagatgcctttctgatttccctcaaggctggtggggtcggt
ctgaacctgacaggtgcagatacagtgatcttggttgacctttggtggaatcctgcggtg
gaagcgcaagccattggccgtgcccatcggatgggtcaggaagaaacggttgaggtctat
cgcttggtgaccaagggaaccattgaagaaaaaattcaggaactccaagaacaaaagaaa
catctggtgtcacaagtattggacggcacagagtcacgtggtagtctgaccctagcagaa
attagagaaattttgggaatttctgaagccagcacttga
DBGET
integrated database retrieval system
