Streptococcus pneumoniae R6 (avirulent serotype 2): spr1517
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Entry
spr1517 CDS
T00060
Symbol
pbp2b
Name
(GenBank) Penicillin-binding protein 2B
KO
K00687
penicillin-binding protein 2B
Organism
spr
Streptococcus pneumoniae R6 (avirulent serotype 2)
Pathway
spr00550
Peptidoglycan biosynthesis
spr01100
Metabolic pathways
spr01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
spr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
spr1517 (pbp2b)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
spr1517 (pbp2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spr01011
]
spr1517 (pbp2b)
Peptidoglycan biosynthesis and degradation proteins [BR:
spr01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
spr1517 (pbp2b)
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AAL00321
UniProt:
P0A3M6
Structure
PDB
PDBj
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Position
complement(1494216..1496273)
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AA seq
685 aa
AA seq
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MRLICMRKFNSHSIPIRLNLLFSIVILLFMTIIGRLLYMQVLNKDFYEKKLASASQTKIT
SSSARGEIYDASGKPLVENTLKQVVSFTRSNKMTATDLKETAKKLLTYVSISSPNLTERQ
LADYYLADPEIYKKIVEALPSEKRLDSDGNRLSESELYNNAVDSVQTSQLNYTEDEKKEI
YLFSQLNAVGNFATGTIATDPLNDSQVAVIASISKEMPGISISTSWDRKVLETSLSSIVG
SVSSEKAGLPAEEAEAYLKKGYSLNDRVGTSYLEKQYEETLQGKRSVKEIHLDKYGNMES
VDTIEEGSKGNNIKLTIDLAFQDSVDALLKSYFNSELENGGAKYSEGVYAVALNPKTGAV
LSMSGIKHDLKTGELTPDSLGTVTNVFVPGSVVKAATISSGWENGVLSGNQTLTDQSIVF
QGSAPINSWYTQAYGSFPITAVQALEYSSNTYMVQTALGLMGQTYQPNMFVGTSNLESAM
EKLRSTFGEYGLGTATGIDLPDESTGFVPKEYSFANYITNAFGQFDNYTPMQLAQYVATI
ANNGVRVAPRIVEGIYGNNDKGGLGDLIQQLQPTEMNKVNISDSDMSILHQGFYQVAHGT
SGLTTGRAFSNGALVSISGKTGTAESYVADGQQATNTNAVAYAPSDNPQIAVAVVFPHNT
NLTNGVGPSIARDIINLYQKYHPMN
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgagactgatttgtatgagaaaatttaacagccattcgattccgattcggcttaattta
ttgttttcaatcgtcattttactctttatgaccattattggtcgtttgttgtatatgcag
gttttgaacaaggatttttacgaaaaaaagctagcctcagctagtcagaccaagattaca
agcagttcagcccgtggggaaatttatgatgctagtggaaaacctttggtagaaaatacg
ttaaagcaggttgtttcctttacgcgtagcaataaaatgacggctacagacttaaaagaa
acagctaaaaagttactgacttatgtgagcatcagttctccaaatttgacagaacgccag
ctggcggattactatttggctgatcctgaaatctataaaaaaatagtggaagctctccca
agcgagaaacgcttggattcagatggcaatcgtctatccgaatcagaactgtataacaat
gcggtcgatagtgtacaaacgagtcaactaaactatacagaggatgaaaagaaagaaatc
tatctttttagtcagttaaatgctgttggaaactttgcgacaggaaccattgctacagat
cctctaaatgattctcaggtggctgttattgcctctatttcaaaggagatgcctggcatt
agtatttctacttcttgggatagaaaggttttggaaacttccctttcttctatagttggg
agtgtatccagtgaaaaagctggtctcccagcggaagaagcagaagcctatcttaaaaaa
ggctattctctaaatgaccgtgtaggaacctcctatttggaaaagcaatatgaagagacc
ttacaaggaaaacgctcggtaaaagaaatccatctggataaatatggcaatatggaaagc
gtggatacaattgaggaaggtagtaagggaaacaatatcaaactgaccattgatttggct
ttccaagatagcgtggatgctttactgaaaagttatttcaattctgagctagaaaatggt
ggagccaagtattctgaaggtgtctatgcagtcgcccttaacccaaaaacaggtgcggtt
ttgtctatgtcagggattaaacatgacttgaaaacgggagagttgacgcctgattccttg
ggaacggtaaccaatgtctttgttccaggttcggttgtcaaggcggcgaccatcagctca
ggttgggaaaatggagtcttgtcaggaaaccagaccttgacagaccagtccattgtcttc
caaggttcagctcccatcaattcttggtatactcaggcttacggttcattccctatcaca
gcggtccaagctctggagtattcatcaaatacctatatggtccaaacagccttaggtctt
atggggcaaacctatcaacccaatatgtttgtcggcaccagcaatctagagtctgctatg
gagaaactgcgttcaacctttggcgaatatggcttgggtactgcgacaggaattgaccta
ccagatgaatctactggatttgttcccaaagagtatagctttgctaattacattactaat
gcctttgggcagtttgataactatacgccgatgcagttggctcagtatgtagcaactatt
gcaaataatggtgttcgtgtggctcctcgtattgttgaaggcatttatggtaataatgat
aagggaggactgggtgacttgattcagcaactgcaaccgacagagatgaataaggtcaat
atatccgactccgatatgagcatcttgcaccaaggtttttatcaggttgcccatggtact
agtggattgacaactggacgtgccttttcaaatggtgccttggtatccattagcggaaaa
acaggtacagccgaaagctatgtggcagatggtcagcaagcaaccaataccaatgcggtg
gcctatgccccatctgataatccccaaatcgctgtcgcagtggtctttcctcataatacc
aatctaacaaatggtgtaggaccttccattgcgcgtgacattatcaatctgtatcaaaaa
taccatccaatgaattag
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