Streptococcus pneumoniae R6 (avirulent serotype 2): spr1584
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Entry
spr1584 CDS
T00060
Name
(GenBank) Conserved hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
spr
Streptococcus pneumoniae R6 (avirulent serotype 2)
Pathway
spr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
spr1584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spr03019
]
spr1584
Messenger RNA biogenesis [BR:
spr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
spr1584
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
ATP-synt_B
V-ATPase_G
DivIVA
KH_KhpA-B
dUTPase
KH_2
Motif
Other DBs
NCBI-ProteinID:
AAL00387
UniProt:
P67283
LinkDB
All DBs
Position
complement(1564646..1566259)
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AA seq
537 aa
AA seq
DB search
MEIMSLAIAVFAVIIGLVIGYVSISAKMKSSQEAAELMLLNAEQEATNLRGQAEREADLL
VNEAKRESKSLKKEALLEAKEEARKYREEVDAEFKSERQELKQIESRLTERATSLDRKDD
NLTSKEQTLEQKEQSISDRAKNLDAREEQLEEVERQKEAELERIGALSQAEARDIILAQT
EENLTREIASRIREAEQEVKERSDKMAKDILVQAMQRIAGEYVAESTNSTVHLPDDTMKG
RIIGREGRNIRTFESLTGVDVIIDDTPEVVTLSGFDPIRREIARMTMEMLLKDGRIHPAR
IEELVEKNRQEIDNKIREYGEAAAYEIGAPNLHPDLMKIMGRLQFRTSYGQNVLRHSIEV
AKLAGIMASELGENAALARRAGFLHDIGKAIDHEVEGSHVEIGMELARKYKEPPVVVNTI
ASHHGDVEAESVIAVIVAAADALSAARPGARSESLESYIKRLHDLEEIANGFEGVQTSFA
LQAGREIRIMVNPGKIKDDKVTILAHKVRKKIENNLDYPGNIKVTVIRELRAVDYAK
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcatgtcgcttgcgattgctgtttttgccgtcatcattggtttagtcattgga
tatgtcagcatctcagctaagatgaaatcatctcaggaagctgcggagttgatgctttta
aatgctgaacaagaagcaactaatttacgtggacaagctgagcgtgaagcggatttactt
gttaatgaagctaaacgtgaaagcaagtctcttaaaaaagaagcactattggaggccaaa
gaagaagccagaaaataccgtgaagaagtggacgctgaattcaaatcagaacgtcaagaa
ctcaaacaaatcgaaagtcgtttgacagagagagctactagccttgaccgtaaggacgac
aatttgacgagtaaagaacaaacacttgaacaaaaagaacaaagtatttctgatagagcg
aaaaaccttgatgcgcgtgaagagcaattagaggaagtcgaaagacaaaaagaagcagaa
ctagagcgtattggtgctctgtctcaggcagaagcacgagatattatcttggctcagaca
gaggaaaacttgaccagggagattgccagtcgcattcgcgaagctgagcaagaggtcaag
gaacgttctgacaaaatggctaaggacatcttggttcaagctatgcaacgtatcgctggt
gaatatgtagcggagtcaacaaactcaacagttcatctgccagacgatactatgaaggga
cgcattattggtcgtgaaggtcgtaacattcgtacctttgaaagtttgacaggggtcgat
gtgattatcgacgatacaccagaagtggtgaccttgtcaggatttgatccgattcgtcgt
gagattgcccgtatgactatggaaatgttgctcaaagatggtcgtatacatccagctcgt
atcgaagagttggttgagaaaaaccgtcaagagattgacaataagattcgtgaatacggt
gaggctgctgcctatgaaattggtgcgccaaaccttcatccagacttgatgaagattatg
ggacgtttgcagttccgtacttcatatggacaaaatgttttgcgccattcgattgaggtt
gctaagttggctggtatcatggcgagcgaacttggtgaaaatgcggctcttgcccgtcgt
gctggattccttcacgatatcgggaaagccattgaccatgaggttgaaggtagccacgtt
gaaatcggtatggaattggcccgtaagtacaaggaacccccagttgtggtgaatacgatt
gctagtcaccacggagatgttgaagctgagagcgtgatagcagttatcgtcgctgcagca
gatgccttgagcgcagcccgtccaggtgctcgtagtgagtctcttgaaagctacatcaag
cgtctccatgatttggaagaaattgctaacggctttgaaggagtgcaaactagctttgcc
cttcaagcaggacgtgaaattcgtatcatggtcaatccaggaaaaatcaaggacgacaaa
gtcacaatcttggctcacaaagttcgtaagaaaattgaaaacaatctcgattatccagga
aatatcaaggtaaccgtgattcgcgagcttcgtgcagtagattatgctaaataa
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