Streptococcus pneumoniae R6 (avirulent serotype 2): spr1794
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Entry
spr1794 CDS
T00060
Symbol
cbf1
Name
(GenBank) Cmp-binding-factor 1
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
spr
Streptococcus pneumoniae R6 (avirulent serotype 2)
Brite
KEGG Orthology (KO) [BR:
spr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spr03019
]
spr1794 (cbf1)
Messenger RNA biogenesis [BR:
spr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
spr1794 (cbf1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
AAL00597
UniProt:
Q8DND8
LinkDB
All DBs
Position
complement(1765923..1766927)
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AA seq
334 aa
AA seq
DB search
MSCQKASLRLIYSIFKKMRKNMKISHMKKDELFEGFYLIKSADLRQTRAGKNYLAFTFQD
DSGEIDGKLWDAQPHNIEAFTAGKVVHMKGRREVYNNTPQVNQITLRLPQAGEPNDPADF
KVKSPVDVKEIRDYMSQMIFKIENPVWQRIVRNLYTKYDKEFYSYPAAKTNHHAFETGLA
YHTATMVRLADAISEVYPQLNKSLLYAGIMLHDLAKVIELTGPDQTEYTVRGNLLGHIAL
IDSEITKTVMELGIDDTKEEVVLLRHVILSHHGLLEYGSPVRPRIMEAEIIHMIDNLDAS
MMMMSTALALVDKGEMSNKIFAMDNRSFYKPDLD
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
ttgagttgtcagaaggcgagcctgcgcttgatctactccattttcaagaaaatgaggaag
aatatgaagattagtcacatgaaaaaagatgagctatttgaaggcttttacctaatcaaa
tcagctgacctgaggcaaactcgagctgggaaaaactacctagcctttaccttccaagat
gatagtggcgagattgatgggaagctctgggatgcccaacctcataacattgaggccttt
accgcaggtaaggttgtccacatgaaaggacgccgagaagtttataacaatacccctcaa
gtcaatcaaattactctccgcctgcctcaagctggtgaacccaatgacccagctgatttc
aaggtcaagtcaccagttgatgtcaaggaaattcgtgactacatgtcgcaaatgattttc
aaaattgaaaatcctgtctggcaacggattgtccgaaatctctacaccaagtatgataag
gaattctactcctatccagctgccaagaccaaccaccatgcctttgaaacgggcttggcc
tatcatacggcgaccatggtgcgtttggcagacgctattagcgaagtttatcctcagctc
aataagagcctgctctatgcggggattatgttgcacgacttggctaaggtcatcgagttg
acgggaccagaccagaccgagtacacggtcagaggcaatcttcttggacatatcgctctg
attgatagcgaaattaccaagacagttatggaactcggcatcgatgataccaaggaagaa
gtcgttttgcttcgtcatgtcatcctcagtcaccacggcttgcttgaatatggaagtcca
gtccgtccacgtattatggaggcagagattatccatatgattgacaatctggatgcaagc
atgatgatgatgtcaacagctctggctttggtggataaaggagagatgtccaataaaatc
ttcgctatggataatcgttccttctataaaccagatttagattaa
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