Streptomyces prasinus: CP972_13025
Help
Entry
CP972_13025 CDS
T07676
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
spra
Streptomyces prasinus
Pathway
spra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CP972_13025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spra03400
]
CP972_13025
Enzymes [BR:
spra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CP972_13025
DNA repair and recombination proteins [BR:
spra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CP972_13025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_5
AAA_22
PIF1
Helicase_RecD
PhoH
AAA_16
NPHP3_N
TraI_hel_assoc_N
nSTAND3
DEAD
AAA
TrwB_AAD_bind
UvrD-helicase
ABC_tran
HTH_IclR
SLFN-g3_helicase
ATPase_2
UvrD_C
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
QEV06473
LinkDB
All DBs
Position
complement(2841382..2843634)
Genome browser
AA seq
750 aa
AA seq
DB search
MSNQSAAPPGERRLATLEGVLERITYSNEENGYTVARVDTGRGANDLLTVVGALLGAQVG
ESLRMEGRWGSHPQYGKQFHVENYTTLLPATVQGIRRYLGSGLVKGIGPVFADRITQHFG
LDTLTVIEEEPKRLIEVPGLGPKRTKKIADAWEEQKAIKEVMLFLQTVEVSTSIAVRIYK
KYGDASISVVKNQPYRLASDVWGIGFLTADKIAQSVGIPHDSPDRVKAGLQYALSQATDQ
GHCYLPEEKLIADAVKLLQVDTGLVIECLAELAAEPEEGEDPGVVREKVPDPEGGDPVTA
VYLVPFHRAELALSAQLLRLLRTGEDRMPGFAGVAWDKALTWLKGRTGADLAPEQEAAVK
LALTEKVAVLTGGPGCGKSFTVRSIVELARAKKAKVVLAAPTGRAAKRLAELTGAEASTV
HRLLELKPGGDAAYDRDRPLDADLVVVDEASMLDLLLANKLVKAVAPGAHLLFVGDVDQL
PSVGAGEVLRDLLADGSPVPAVRLTRVFRQAQQSGVVTNAHRINAGQHPLTDGMKDFFLF
VEDDTEEAGRLTVDVAARRIPARFGLDPRRDVQVLAPMHRGPAGAGTLNGLLQQAVTPGR
PDLPEKRFGGRVFRVGDKVTQIRNNYEKGANGVFNGTVGVVTSLDPVDQKLTVLTDEDEE
VPYEFDELDELAHAYAVTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRAKRLVVL
VGSRRAIGQAVRTVSAGRRCTALDFRLAGA
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccagtccgcggcgccccccggtgagcggcgtctcgccaccctcgaaggcgtc
ctcgagcgcatcacgtactccaacgaggagaacggctacacggtcgcccgtgtcgacacc
ggcaggggagccaacgacctgctcaccgtcgtcggggcgctgctcggggcgcaggtgggc
gagtcgctgcggatggaggggcgctgggggtcgcacccgcagtacggcaagcagttccac
gtcgagaactacacgacgctgctcccggccaccgtccaggggatccggcgctacctcggt
tccgggctggtcaagggcatcgggccggtcttcgccgaccgcatcacgcagcacttcggg
ctggacaccctgaccgtcatcgaggaggagcccaagcggctcatcgaggtccccggcctc
gggcccaagcgcacgaagaagatcgccgacgcctgggaggagcagaaggcgatcaaggag
gtcatgctcttcctccagaccgtcgaggtgtcgacgtcgatcgcggtgcggatctacaag
aagtacggggacgcctcgatctccgtcgtgaagaaccagccctaccggctggcctccgac
gtctggggcatcggcttcctcaccgccgacaagatcgcccagtccgtcggcatcccgcac
gacagcccggaccgggtcaaggccggtctgcagtacgcgctgtcgcaggccaccgaccag
ggccactgctacctccccgaggagaagctgatcgccgacgcggtgaagctgctccaggtg
gacaccgggctcgtcatcgagtgcctggccgagctggccgccgagccggaggagggcgag
gaccccggcgtcgtacgggagaaggtgcccgacccggagggcggcgaccccgtcaccgcc
gtctacctggtgcccttccaccgtgccgagctggccctctccgcgcagctgctgcgcctc
ctgcgcaccggcgaggaccggatgccggggttcgccggggtggcctgggacaaggcgctg
acctggctgaaggggcgtacgggcgccgatctcgcccccgagcaggaggccgccgtcaag
ctggcgctcaccgagaaggtcgccgtcctcaccggcggccccggctgcggcaagtccttc
acggtgcggtccatcgtggaactggcccgcgcgaagaaggccaaggtggtgctcgccgcc
ccgaccgggcgcgccgccaaacgcctcgcggaactgaccggcgccgaggcctccaccgtc
caccgcctgctggagctcaagcccggcggcgacgccgcctacgaccgggaccggccgctg
gacgccgatctggtggtggtcgacgaggcgtccatgctcgacctgctgctggccaacaaa
ctggtcaaggcggtggccccgggcgcacacctgctcttcgtcggcgacgtcgaccagctc
cccagcgtcggcgcgggcgaggtgctccgggacctgctggcggacggcagccccgtgccc
gccgtccgcctcacccgcgtcttccgccaggcccagcagtcgggcgtggtgaccaacgcg
caccggatcaacgccgggcagcacccgctcaccgacggcatgaaggacttcttcctcttc
gtcgaggacgacacggaggaggcgggccggctcaccgtggacgtcgccgcgcgccgcatc
ccggccaggttcgggctcgacccgcgccgggacgtgcaggtcctcgcccccatgcaccgc
ggcccggccggcgccggcacgctgaacggcctgctccagcaggccgtcacccccggccgc
cccgacctgcccgagaagcggttcggcggccgggtcttccgcgtcggcgacaaagtcacc
cagatccgcaacaattacgaaaagggtgcgaacggggtcttcaacggcaccgtcggcgtc
gtcacctcgctcgacccggtcgaccagaagctgacggtgctgacggacgaggacgaggag
gtgccgtacgagttcgacgaactggacgagctggcccacgcctacgcggtgaccatccac
cgttcccagggcagcgagtacccggccgtcgtcatcccggtgaccaccggcgcctggatg
atgctccagcggaacctgctctacacggcggtcacccgggccaagcggctggtcgtcctg
gtcggctcccgcagggcgatcgggcaggcggtccgcacggtctcggccggccggcgctgt
acggcgctcgacttccggctcgcgggcgcctga
DBGET
integrated database retrieval system
