Streptomyces prasinus: CP972_18620
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Entry
CP972_18620 CDS
T07676
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
spra
Streptomyces prasinus
Brite
KEGG Orthology (KO) [BR:
spra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spra03021
]
CP972_18620
Transcription machinery [BR:
spra03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CP972_18620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
Sigma70_ECF
HTH_3
HTH_24
DUF7343
MarR
Motif
Other DBs
NCBI-ProteinID:
QEV07385
UniProt:
A0ABX6AXB1
LinkDB
All DBs
Position
complement(4091443..4092363)
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AA seq
306 aa
AA seq
DB search
MSADQGSSKVLTLAESETAPNALDVLGPIDDVPALAAAPAPDLPETPETPDTAAIDTRTL
SRSLFLRLAALDEDSPERGYVRDTLIELNLPLVRYAAARFRSRNEPMEDIVQVGTIGLIK
AIDRFDCERGVEFPTFAMPTVVGEIKRFFRDTSWSVRVPRRLQELRLALTKAGDELSQKL
DRSPTVPELAAVLGVSEEDVVDGLAVGNAYTASSLDSPAPEDDGGEGSLADRLGYEDTAL
EGVEYRESLKPLLAKLPPRERRIIMLRFFANMTQSQIGEEVGISQMHVSRLLTRTLAQLR
EGLISD
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagaccagggcagctcgaaggtgctcacgctcgcggagagcgagacagctccc
aatgctctcgacgtactcggccccatcgacgatgtcccggccctcgcggccgcgcccgct
ccagatcttccggagacaccggagacgccggacacggcggccatcgacacccgcaccctg
tcccgctccctgttcctgcggctcgccgcactcgacgaggacagcccggaacgcggctac
gtccgggacacgctgatcgaactcaacctcccactggtgcggtacgcggcggcccgcttc
cgctcgcgcaacgagccgatggaggacatcgtccaggtcggcaccatcggactgatcaag
gcgatcgaccgcttcgactgcgaacggggcgtggagttcccgacgttcgcgatgccgacg
gtggtcggcgagatcaagcggttcttccgcgacacgtcgtggtcggtgcgcgtgccgcgc
cggctccaggagctgcgcctggcgctgacgaaggccggcgacgagctctcccagaagctc
gaccgctccccgacggtccccgaactcgccgcggtgctgggcgtgtccgaggaggacgtg
gtcgacgggctcgcggtcggcaacgcgtacacggcgtcctcgctggactccccggcgccc
gaggacgacggcggcgagggctcgctcgcggaccgcctcggctacgaggacacggcgctg
gagggcgtggagtaccgggagtcgctcaagcccctgctggccaagctgccgccccgggag
cggcggatcatcatgctgcgcttcttcgccaacatgacgcagtcacagatcggcgaggag
gtcggcatctcccagatgcacgtctcccggctgctcacccgaaccctggcccagctgcgc
gagggcctcatctcggactga
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