Streptomyces prasinus: CP972_24330
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Entry
CP972_24330 CDS
T07676
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
spra
Streptomyces prasinus
Pathway
spra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CP972_24330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spra03021
]
CP972_24330
03019 Messenger RNA biogenesis [BR:
spra03019
]
CP972_24330
Transcription machinery [BR:
spra03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CP972_24330
Messenger RNA biogenesis [BR:
spra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CP972_24330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
AAA
NACHT
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
QEV08332
UniProt:
A0ABX6AZU0
LinkDB
All DBs
Position
5361860..5363941
Genome browser
AA seq
693 aa
AA seq
DB search
MSDTTDLMGARVEETAAAPATDASAPASGAGSRRRRGTGLEGMVLAELQQVASGLGIRGT
ARMRKSQLIEVIKEAQAAGGSAAPKSEAPAETAETKPKRRATSRTRTGDTAEKKPAAEAT
AEQATAQQQIDIPGQPSPKATAPAEQAPAEQAPATRRRRVTADAGAPAAAEQAPAETKSD
AKAEGQAQSQQSPAQGDAKGDHDGGDGRRRDRRERGRDRGERTDRGDRNDRAERGDRGDR
GDRRGKSDDQQQNQSGQGGQGGQGRQQNQPQGGGRQDDGYDDDGGGRRGRRGRYRDRRGR
RGRDEVQEPQVNEDDVLIPVAGILDILDNYAFIRTSGYLPGPNDVYVSLAQVRKNGLRKG
DHLTGAVRQPKEGERREKFNALVRLDSVNGMAPEHGRGRPEFNKLTPLYPQDRLRLETDP
GVLTTRIIDLVSPIGKGQRGLIVAPPKTGKTMIMQAVANAITHNNPECHLMVVLVDERPE
EVTDMQRSVKGEVISSTFDRPAEDHTTVAELAIERAKRLVELGHDVVVLLDSITRLGRAY
NLAAPASGRILSGGVDSTALYPPKRFFGAARNIEDGGSLTILATALVDTGSRMDEVIFEE
FKGTGNMELKLDRKLADKRIFPAVDVDASGTRKEEILLGSDELAVTWKLRRVLHALDSQQ
AIELLLDKMKQTKSNGEFLLQIQKTTPAPGNGD
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacaccaccgatctgatgggcgcacgtgtcgaggagaccgctgccgcgcccgcc
acggacgcctccgcgcctgccagcggtgccggctcccggcggcgccggggtaccggcctc
gaaggcatggtgctggccgagcttcagcaggtcgcatccggcctcggcatcaggggcacc
gcgcgcatgcgcaagagccagctgatcgaggtcatcaaggaggcgcaggcggcgggcggc
tccgccgcgccgaagagcgaggcccccgccgagacggcggagaccaagcccaagcgtcgc
gccacctcgcgaacccgtacgggtgacaccgccgagaagaagcccgctgccgaggccacc
gccgaacaggccaccgcccagcagcagatcgacattcccggccagccctccccgaaggcc
accgccccggccgagcaggctccggccgagcaggcccccgccacgcgtcgccgtcgggtc
accgcggacgcgggcgctccggccgccgccgagcaggcccccgccgagacgaagagcgac
gcgaaggccgaaggccaggcgcagtcgcagcagtccccggcccagggtgacgccaagggc
gaccacgacggcggtgacggccgccgccgtgaccgccgggagcgtggccgtgaccgcggc
gagcgcaccgaccgcggtgaccgcaacgaccgtgccgagcgcggcgatcggggcgaccgc
ggggaccgtcgaggcaagagcgacgaccagcagcagaaccagagcggccagggtggtcag
ggcggccagggccgtcagcagaaccagccgcagggcggcggccgtcaggacgacggttac
gacgacgacggaggcggccgtcgcggccgtcgcggccgctaccgcgaccgtcggggccgt
cgcggtcgtgacgaggtgcaggagccgcaggtcaacgaggacgacgtcctgatcccggtc
gcgggcatcctcgacatcctcgacaactacgcgttcatccggacctccggctacctgccc
ggcccgaacgacgtgtacgtctccctcgcccaggtccgcaagaacggcctgcgcaagggc
gaccacctcaccggcgcggtgcgccagccgaaggagggcgagcgccgcgagaagttcaac
gcgctggtccgcctcgactccgtcaacggcatggcgcccgaacacggccgcggccgaccg
gagttcaacaagctcaccccgctctacccgcaggaccgcctccgcctggagacggacccg
ggcgtgctgaccacgcggatcatcgacctcgtgtcgccgatcggcaagggccagcgcggt
ctgatcgtggccccgccgaagaccggcaagaccatgatcatgcaggcggtcgccaacgcg
atcacccacaacaaccccgagtgccacctgatggtcgtcctcgtcgacgagcgtccggaa
gaggtcaccgacatgcagcggtcggtgaagggcgaggtcatctcctcgaccttcgaccgc
cccgccgaggaccacaccacggtcgccgagctcgccatcgagcgcgccaagcgtctggtg
gagctgggccacgacgtcgtcgtgctgctcgactcgatcacgcgtctgggccgtgcgtac
aacctcgccgccccggcctccggccgcatcctgtccggtggtgtcgactcgacggcgctg
tacccgccgaagcgcttcttcggtgcggcccgcaacatcgaggacggcggctcgctgacc
atcctcgccaccgcgctggtggacaccgggtcccgcatggacgaggtgatcttcgaggag
ttcaagggcaccggcaacatggagctcaagctcgaccgcaagctcgccgacaagcgcatc
ttccccgcggtggacgtcgacgcgtccggtacccgcaaggaggagatcctgctgggcagc
gacgagctggccgtcacctggaagctccgccgggtgctgcacgcgctcgactcgcagcag
gcgatcgagctgctcctcgacaagatgaagcagacgaagtcgaacggcgagttcctgctg
cagatccagaagacgacgccggcgccgggcaacggcgactga
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