Streptomyces prasinus: CP972_26030
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Entry
CP972_26030 CDS
T07676
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
spra
Streptomyces prasinus
Brite
KEGG Orthology (KO) [BR:
spra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spra03009
]
CP972_26030 (rimO)
Enzymes [BR:
spra01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CP972_26030 (rimO)
Ribosome biogenesis [BR:
spra03009
]
Prokaryotic type
ribosomal protein modification factors
CP972_26030 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
QEV08630
LinkDB
All DBs
Position
5766627..5768102
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AA seq
491 aa
AA seq
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MPDRRTVALVTLGCARNEVDSEELAGRLEADGWQLVEDAEDADVAVVNTCGFVEAAKKDS
VDALLEANDLKGHGRTQAVVAVGCMAERYGKELAEALPEADGVLGFDDYTDISDRLQTIL
NGGIHASHTPRDRRKLLPISPAERQESAASVALPGHAPVDLPEGLAPASGPRAPLRRRLE
GTPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLNETRWLAEQGVKEIMLVSENNT
SYGKDLGDIRLLESLLPELAEVDGIERVRVSYLQPAEMRPGLIDVLTSTPGVVPYFDLSF
QHSAPDVLRAMRRFGDTDRFLELLDTIRSKAPEAGVRSNFIVGFPGESESDLAELERFLT
HARLDAIGVFGYSDEEGTEAATYEHKLDEDVVAERLARVSRMAEELVSQRAEERVGETVR
VLVESVDEEEGVYGRAAHQAPETDGQVLLTSGTGLRPGRMVEAKVVGTEGVDLVAEPLFQ
GSPALSEEAGR
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatcgccgcaccgtcgcactcgtcacccttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgtctggaggcggacggctggcagctcgtggaggacgccgag
gacgcggacgtcgccgtcgtgaacacctgcggtttcgtcgaagccgccaagaaggactcc
gtcgacgccctcctggaggccaacgacctcaagggccacgggagaacgcaggccgtggtg
gcggtgggctgcatggccgagcggtacggcaaggaactcgccgaggcgctccccgaagcc
gacggcgtgctcggcttcgacgactacaccgacatctcggaccgcctccagaccattctg
aacggcggcatccacgcctcccacaccccgcgtgaccggcgcaagctgctgccgatcagc
cccgccgagcggcaggagtccgccgcgtccgtcgcgctcccgggacacgccccggtggac
ctgcccgagggcctcgccccggcctccggcccccgcgcgcccctgcggcgccggctggag
ggaaccccggtcgcctccgtgaagctcgcctccggctgcgaccggcgctgctccttctgc
gccatcccgtccttccgcggctccttcatctcgcgccggcccagcgacgtgctgaacgag
acgcggtggctggccgagcagggtgtgaaggagatcatgctggtctccgagaacaacacc
tcctacggcaaggacctgggcgacatccgcctcctggagtccctgctgcccgagctcgcc
gaggtcgacggcatcgagcgggtccgcgtcagctacctccagcccgccgagatgcgcccc
ggcctgatcgacgtgctgacctccacccccggggtcgtcccgtacttcgacctgtccttc
cagcactccgcgcccgacgtgctgcgcgcgatgcgccgcttcggcgacacggaccgcttc
ctggagctcctcgacaccatccggagcaaggcgcccgaggccggtgtgcgctccaacttc
atcgtcggcttccccggcgagtccgagtccgacctcgccgagctcgagcggttcctgacc
cacgcacggctggacgccatcggcgtcttcggctactccgacgaggagggcaccgaagcg
gcgacgtacgagcacaagctggacgaggacgtcgtggccgagcggctggcgcgggtctcc
cggatggccgaggaactcgtctcgcagcgcgccgaggagcgggtcggcgagaccgtgcgc
gtgctggtggagtccgtcgacgaggaggagggcgtgtacggccgtgcggcgcaccaggct
cccgagaccgacggccaggtgctgctcacgagcggcacgggtctgcgtcccggccgtatg
gtcgaggcgaaggtcgtcggcacggaaggtgtcgacctggtggccgagccgctgttccag
ggttcgcccgcgctgagcgaggaggcgggcagatga
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