Streptomyces prasinus: CP972_26270
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Entry
CP972_26270 CDS
T07676
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
spra
Streptomyces prasinus
Pathway
spra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CP972_26270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spra03019
]
CP972_26270
03400 DNA repair and recombination proteins [BR:
spra03400
]
CP972_26270
Enzymes [BR:
spra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CP972_26270
Messenger RNA biogenesis [BR:
spra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CP972_26270
DNA repair and recombination proteins [BR:
spra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CP972_26270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
AAA_22
Helicase_RecD
Zn_ribbon_TFIIB
SWI2_SNF2
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
QEV08675
LinkDB
All DBs
Position
5822320..5824482
Genome browser
AA seq
720 aa
AA seq
DB search
MNDLELRAEADAILAELVGDPGGTARLREDQWQAVEALVVDHRRALVVQRTGWGKSAVYF
VATALLRRRGSGPTVIVSPLLALMRNQVESAARAGIRAHTINSANPEEWEAIHEEVEQGK
VDVLLVSPERLNSVDFRERMLPRLAATTGLLVVDEAHCISDWGHDFRPDYRRLRTMLQEL
SPGVPVLATTATANARVTADVADQLGTGAGEALVLRGTLERESLRLGVVRLPDAAHRLAW
LGEHLNDLSGSGIIYTLTVSAAEEVTAYLRARGFAVASYTGRTENADRQQAEADLLANRV
KALVATSALGMGFDKPDLGFVVHLGSPSSPISYYQQVGRAGRGVEHADVLLLPGKEDEAI
WRYFAEVAFPPEAQVRQTLAALADAGRPLSVPALEALVDLRRTRLEMMLKVLDVDGAVRR
VKGGWTSTGADWVYDAERYAWVARQRAAEQQAMRDYVGTSRCRMEFLRRQLDDEKAAPCG
RCDNCAGTWADPGVSSQALAGATGELERPGVEVEPRRMWPTGMPAVGIDLKGRIPAKEQC
SPGRALGRLSDIGWGNRLRPLLAEQAPDGPVPDDVLQAAVAVLADWARSPGGWAVTGPDA
SARPVGVVAMPSLNRPRLVGSLAERVATVGRLPFLGTLGHTGHGEAHRAHRSNSAQRLRT
LSAAFTVPEELAGALAAAPHGPVLLVDDYSDSGWTLAVAARLLRRAGAEQVLPLVLAVTA
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatctggagctgcgtgccgaagccgacgccattctcgccgagctggtcggtgat
cccgggggcacggcacggctccgggaggaccagtggcaggcggtggaggccctggtggtg
gaccatcgccgtgccctggtggtgcaacgcaccggatggggcaagtcggcggtgtacttc
gtggccaccgcgctgctccgccggcgtggctccggccccacggtgatcgtctcgccgctg
ctggcgttgatgcgcaaccaggtcgagtcggcggcgcgggccggcatccgggcacacacg
atcaactcggcgaaccccgaggagtgggaggccatccacgaggaggtcgagcaggggaag
gtcgacgttctcctcgtgagcccggaacgcctcaactccgtcgacttccgcgaacggatg
ctgccccggctcgcggccacgaccggcctcctggtcgtcgacgaggcccactgcatctcc
gactggggtcatgacttccgccccgactaccgcaggctccgcacgatgctgcaggagctc
tccccgggggtcccggtgctggccaccacggccacggccaacgcccgtgtcacggcggac
gtggccgaccagctgggcaccggagccggcgaggccctggtgctgcgcggcacgctggaa
cgggaaagcctgcggctcggcgtggtccggctgccggacgccgcccaccgtctggcctgg
ctcggcgagcacctgaacgacctgtcgggctcagggatcatctacacgctgaccgtctcg
gccgccgaggaggtcaccgcctatctgcgcgcgcgtggcttcgccgtggcctcgtacacc
ggccggacggagaacgccgatcgccagcaggccgaggccgacctgctggcgaaccgggtg
aaggccctggtggcgacctccgccctcgggatgggcttcgacaagccggacctgggcttc
gtggtccatctcggctcgccgtcctcacccatttcgtactaccagcaggtgggccgtgcg
ggccgcggtgtggagcacgccgacgtcctgctgctccccggcaaggaggacgaggcgatc
tggcgttacttcgccgaggtcgccttcccgcccgaggcgcaggtccgccagaccctcgcc
gccctcgccgacgcggggcgcccgttgtccgtgcccgccctggaggcgctggtggacctc
cggcggacccgcctcgagatgatgctgaaggtcctggacgtggacggtgccgtacggcgg
gtgaagggcgggtggacgtccaccggcgcggactgggtctacgacgccgagcgctacgcc
tgggtcgcccgccagcgcgccgccgagcagcaggccatgcgcgactacgtcggcacctcc
cggtgccggatggagttcctgcgccgccagctggacgacgagaaggccgccccgtgcggc
cgctgcgacaactgtgcgggaacctgggcggatcccggagtctcgtcccaggcactggcc
ggcgcgaccggtgaactggagcgtccgggcgtggaggtcgaaccgcgccgcatgtggccc
accgggatgcccgccgtgggcatcgacctcaaggggcgcatcccggcgaaggagcaatgc
tccccgggacgagccctgggccgtctctcggacatcggctggggcaaccgcctgcgcccg
ctcctggcggagcaggctcccgacggtccggtccccgacgacgtcctccaagcggcggtg
gcggtcctcgccgactgggcgcgttccccgggcgggtgggcggtcacgggcccggacgcg
tcggcgcggcccgtgggagtcgtcgccatgccttctctgaaccggccccggctcgtcggt
tcccttgccgaacgggtggccaccgtcggacgtctcccgttcctcggcaccctcggtcac
accgggcacggcgaggcgcaccgggcccacaggagcaactcggcccagcggctccggacg
ctgtccgccgccttcaccgttcccgaggagctggccggcgccctggcagccgctccgcac
ggtccggtcctgctcgtggacgactactccgattccggctggaccctcgcggtggccgcc
cgcctgctgcgccgggcgggtgcggagcaggtcctcccgctggtcctcgccgtgacggcc
tga
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