Streptomyces prasinus: CP972_30270
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Entry
CP972_30270 CDS
T07676
Name
(GenBank) type IV secretion protein Rhs
Organism
spra
Streptomyces prasinus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
T7SS_signal
DUF6531
TEN_YD-shell
RHS
OCRE
Big_7
Motif
Other DBs
NCBI-ProteinID:
QEV09321
LinkDB
All DBs
Position
complement(6758423..6763201)
Genome browser
AA seq
1592 aa
AA seq
DB search
MGIGDFIKDVTPDVVEDAVEDGVELLGDRVEGAGNWTADRLDDAGWQSGADWVREQSRSV
ANRMGAEVDEMDLGQSEDKTKLVHGSAEKIRSTAGKLRAFHTAFDDAGEGLKGLDSSQLK
GEAAEALRTAVSTQPPKWFTGADACEKAAVALEAFAGTVSWAQGQAQTAIEKWKEGVKAS
EDAADAHRKKVDTYNRAVDRYNALPPDKRDPSTLPPCPAPTFEDPGRKLMSEAQEILAEA
RKQRNTAAETARTAVRAARDTAPEKPSYAQQAGQGLQEAQIMGDHVGGGLIKGTAGLVNF
VRSVNFLDPYNLTHPAEYATNLNSLASGLVLAANDPVGTGRQMVGDFMKDPYEGFGRLLP
DAALTVATGGGGAAVKGVRVAADAADAARVRRLVDDAPDGTHDRPDHTRTTDGTDPVDLA
SGRMFLPQTDVEIPGILPLVFTRRTESGNTSGRFLGPAWTSTVDERLVIDPVGVVHVTPE
GLLIPYPHPIPGSPTHPESGTARTQLARRGDGDYTLTDPDTGLTLHFTAPPDAEPGGDGT
AWLASVTDRNGHTITVDRTEDGLPLSLVHSAGHRVRLTCADGRITALALAGAGEDGADLP
LMAYGYDQDGNLTTVTKPSGATTTFLYDDRRRVTAWIDSHHSRYDYAYDDHDRVIAEGGE
AGHVQITLAYTAPDTETGHRTTTLTTADGRSTRHLIDHRCRVVATTDPLGHTTHFTYDTH
GNLLTRTDPLGRTTAHTYDPDGRLIGVTRPDGTELRITRGPFGLPAEVVGPDGARTTYAY
DERGNRTTVTDPAGHATHCTYDRAGRLTSVTDALGATTQVVCDVAGLVVAVSDPSGATTR
TERDGLGRPVRATDPMGGVTRLEWTADGQLARRTAPDGSTQSWTYDGEGNCLTHTDPVGG
VTRYAYTHFDLPLATTRPDGTRYAFQHDNDLRLTHVTGPQGLIWTYEYDAVGNIVSETDF
DGRTLAYRLDAAGQLTARTDALGGTISFERDQLGQVLRKNVDGQVTTYTYDKAGRLLEAI
GPDSEVRYQYDRRGQVKTELVDGRPLIYSYDGLGRRTRRTTPTGHVTSYAYDSDGLPRRL
TAGDRRIDFTHDAAGRELTRAYGDAVTMTSAWDEAGRLAVQHTTAGARPVTGRAYTYRAD
GHLISVADRLSGTRTFALDPMGRVTTVHAPGWTERYAYDEAGNQTSATWPDRHPGGEATG
ERTYSGTRITRAGSVRFEHDALGRVTLRQKARLSRKPETWRYAWDTENRLTSVTTPDGTR
WRYRYDPLGRRTAKQRLAADGENVVEEARFTWDGLTLCEQTSHRPDVPSTVVLTWDHRDV
VPLAQTERILTADGGQEEIDRRFFAIATDLVGTPTELIDETGDIAWRSRSTLWGTTAWAR
DSSAYTPLRFPGQYYDPETGLHYNCFRHYDPETGRYTSPDPLGLAPAPNPVGYVDNPHTG
CDPLGLMPKYTKEEKAQQAREKAIQTADEVIERAQGNRMKKAGNYHADSMHGFSDERVLE
ILKSPDAVYHSTAGSGRLVFRQGEDIVVTEGGGAGAGNAITAYGPSGTRGDSGVRALGGL
PSDPGGPITHADVVEGRIPAKNGYLAPAVQIR
NT seq
4779 nt
NT seq
+upstream
nt +downstream
nt
atgggaatcggcgacttcatcaaggacgtcacgccggatgtggtggaggacgcggtcgag
gacggcgtcgagttgctcggtgaccgggtcgagggcgcgggcaactggaccgcggaccgg
ctggacgacgccggctggcagtccggtgcggactgggtgcgcgagcagtcgcgttcggtc
gcgaaccggatgggcgccgaggtcgacgagatggacctcgggcagagtgaggacaagacc
aagctcgtccacggcagtgcggagaagatccgttccaccgccgggaaactccgcgcgttc
cataccgcgttcgacgacgccggcgagggtctgaaggggttggactcctcccagctcaag
ggcgaggccgccgaggcgctgcgcacggcggtgagcacccagccgcccaagtggttcacc
ggcgcggacgcctgcgagaaggcggcggtcgctctggaggcgttcgcgggcaccgtgagt
tgggcgcaggggcaggcgcagacggcgatcgagaagtggaaggagggcgtgaaggcgtcc
gaggacgccgccgacgctcaccgcaagaaggtcgacacctacaacagggccgtcgaccgc
tacaacgcgctgccgcccgacaagcgtgacccgtccacgctgccgccgtgtccggcgccg
acgttcgaggacccgggcagaaagctgatgagcgaggcgcaggagatcctcgccgaggcc
cgcaagcagcgcaacaccgcggccgagaccgcgcgcaccgcggtgcgcgcggcacgggac
acagcccccgagaagccgtcgtacgcgcagcaggcggggcagggtctgcaggaagcacag
atcatgggcgaccacgtcggcggcggcctgatcaagggcaccgccgggctggtgaacttc
gtccgctcggtcaacttcctggacccctacaacctcacccacccggccgagtacgccacg
aacctcaacagcctggcctccggcctggtgctggccgccaacgatccggtcggcaccggc
aggcagatggtcggcgacttcatgaaggacccctacgaggggttcggccggctgctgccc
gacgccgcgctgaccgtggccaccggcgggggcggcgccgcggtcaagggcgtgcgcgtc
gccgcggacgccgccgacgccgcgcgggtgcgccggctggtcgacgacgccccggacggc
acccacgaccgccccgaccacacccgcaccaccgacggcaccgaccccgtcgacctcgcc
tcggggcggatgttcctgccccagacggacgtggagatccccggaatcctgcccctggtg
ttcacccggcgcaccgagtccggcaacaccagcggccgctttctgggacccgcctggacc
tccaccgtcgacgagcgcctggtgatcgatccggtcggcgtcgtccacgtcacccccgag
ggcctgctgatcccgtatccgcatccgataccgggctcccccacgcaccccgagtccggc
accgcccgcacccagctggcccgccgcggtgacggcgactacaccctcaccgaccccgac
accggcctgaccctccacttcaccgcaccacccgacgccgagcccggcggcgacggcacc
gcctggctggcatccgtcaccgaccgcaacggccacacgatcaccgtcgaccgcaccgag
gacgggctgccgctgtccctggtccactcggccggccaccgggtgaggctgacctgtgcc
gacggccggatcaccgccctcgccctggccggtgcgggcgaggacggcgccgatctgccg
ctgatggcctacggctacgaccaggacggcaacctcaccaccgtcaccaagccctccggc
gccaccaccaccttcctctacgacgaccgccgccgggtcaccgcctggatcgactcccac
cacagccgctacgactacgcctacgacgaccacgaccgcgtcatcgccgagggcggcgaa
gcgggccacgtccagatcaccctcgcctacaccgcaccggataccgagaccggtcaccgc
accaccacgctgaccaccgccgacgggcggagcacccgccacctgatcgaccaccgctgc
cgggtcgtcgccaccaccgaccccctcggccacaccacccatttcacctacgacacccac
ggcaacctgctcacccgcaccgacccgctgggccgcaccaccgcccacacctacgacccc
gacggccggttgatcggcgtgacccggcccgacggcaccgaactgcgcatcacacgagga
ccgttcgggctgcctgccgaggtcgtcgggcccgacggcgcccgcacgacctacgcgtac
gacgagcgcggcaaccggaccacggtcaccgatccggccggtcacgccacccactgcacc
tacgaccgtgccggccgcctcacctccgtcaccgacgccctcggcgccaccacacaggtg
gtctgcgacgtcgcgggcctggtcgtggcggtgagcgacccgtcaggcgccaccacccgc
accgaacgggacgggctgggccgcccggtccgcgccacagaccccatgggcggtgtcacc
cggctggagtggaccgcggacggacaactcgcccgccgtaccgccccggacggcagtacc
cagtcgtggacctatgacggcgagggcaactgcctcacccataccgacccggtcggcgga
gtgacccgctacgcatacacccacttcgacctcccgctcgccaccacacggcccgatggc
acgcgctacgcgttccagcacgacaacgacctgcgtctcacccatgtcaccggtccacaa
ggcctgatctggacctacgagtacgacgcggtcggcaacatcgtctccgagaccgacttc
gacgggcgcaccctcgcctaccgcctggacgcagcgggacagctcaccgcccgcaccgac
gcactcggcggaaccatctccttcgaacgcgaccagctcggccaggtgctccgcaagaac
gtcgacgggcaggtgacgacctacacgtacgacaaggcgggccgcctcctggaggcgatc
ggcccggacagcgaggtccgctaccagtacgaccgccgcgggcaggtcaaaacagagctg
gtggacggccgcccgctcatctactcctacgacggcctggggcgccgcacccgccggacc
acacccaccggtcacgtcacgtcctacgcctacgactccgacggacttccccggcgactc
accgcgggagaccggcgaatcgacttcacccacgacgccgccggccgcgaactcacccgc
gcctacggggacgccgtcaccatgacgtcggcctgggacgaagccggacggctcgccgta
cagcacaccaccgccggagcccgccccgtcaccggccgcgcctacacctaccgcgccgac
ggccatctgatatccgtcgcagaccgactgtcaggcacccgcaccttcgctctcgacccg
atgggccgggtcaccaccgtccatgccccgggctggacggagcggtacgcctacgacgag
gcgggcaaccagacttctgcgacctggccggaccggcatccgggcggcgaggcgaccggg
gagcggacctacagtggcacccgtatcacccgcgccggaagcgtccgcttcgagcacgac
gccctcggccgcgtcaccctgcggcagaaagcccgcctgtcccgcaagcccgagacctgg
cgctacgcgtgggacacggagaaccgcctcacctccgtcaccacccccgacgggacccgg
tggcgctaccgctacgaccccctgggccgccgcaccgccaagcagcgtctggcggccgac
ggcgagaacgtggtcgaggaggcccgcttcacctgggacggcctcaccctgtgcgaacag
accagccaccggcccgacgtccccagcacggtcgtccttacctgggaccaccgggacgtc
gtccccctggcccagaccgagcgcatcctcacggccgacggcggccaggaggagatcgac
cggcggttcttcgccatcgccaccgatctggtcggcacgccgaccgaactcatcgacgag
accggtgacatcgcctggcgcagccggagcacgctctggggcaccaccgcctgggcccgg
gacagcagcgcctacaccccgctgcgcttccccggccagtactacgaccccgagaccggt
ctccactacaactgcttccgccactacgaccccgagaccggccgctacacctccccggac
ccgctgggcctggctcccgcgccgaaccccgtcggctatgtggacaatccgcacacaggg
tgtgacccgctgggtctgatgcccaagtacacgaaggaggaaaaagcccagcaggccagg
gaaaaggccatccagaccgcggacgaggtcatcgagagagcccagggcaaccggatgaag
aaggccgggaactaccacgcggattccatgcacggcttcagtgacgagcgggtcttggag
atcctcaagagcccggacgccgtttaccactcgacggcgggcagcgggcggctggtcttt
cgacaaggggaggacatcgtggtgacagagggtggaggtgcgggggcgggcaatgccatc
acggcgtacggcccgtccggtaccaggggggactccggtgtgcgggccctcggaggcctg
ccctccgaccccggagggccgattacccacgcagacgtggtggagggcaggattccggcc
aagaacggctacctggctcccgcggtgcagattcgatga
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