Sinorhizobium prairiense: N0Q91_23810
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Entry
N0Q91_23810 CDS
T11548
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
spre Sinorhizobium prairiense
Pathway
spre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N0Q91_23810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spre03019
]
N0Q91_23810
Enzymes [BR:
spre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
N0Q91_23810
Messenger RNA biogenesis [BR:
spre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
N0Q91_23810
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
NAT10_TcmA_helicase
AAA_22
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
WEJ18530
LinkDB
All DBs
Position
pK101c:105264..106760
Genome browser
AA seq
498 aa
AA seq
DB search
MTTFKELGLSEHIVATLSANGFEKPTPIQAQAIPLVLKDHDLIGLAQTGTGKTAAFGLPM
IEKLVADGRRPDPRNIRALVLAPTRELVNQIATNLKLFVKKSPLKIGLVVGGVSINKQTE
QLARGVDILVATPGRLLDLVSRKAVTLTQARYLVLDEADQMLDLGFIHDLRKISKLVPKN
RQTLLFSATMPKLIAELAGEYLTDPVKVEVSPPGKAADKVEQYVHFVPGKDLKTTILKQT
LTANPDGLSLIFSRTKHGAEKLMKHLDHVGFKAASIHGNKSQGQRERALKAFRDGEIRVL
VATDVAARGIDIPGVTHVYNYDLPEVPDAYVHRIGRTARNGRDGIAIAFCAPDEIRLLRD
IEKLMGIQIAVASGEAPADQARPSKGRGGRGNGQPRGNGAGQRQGGPRRDRPQRQAAAGG
FAGDDLLRDERSHERRDQRAAGHGPADGRPEGHRNHKAQKHHGRPGPQQAGRRGSEQSGE
RNGGGNRPQRADGRGHQR
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
ttgaccactttcaaagagcttggcctctccgagcacattgtggcgacactctccgccaat
ggtttcgaaaagccgacgcccatccaggctcaagccattccgctggtcctgaaagaccat
gacctcatcggccttgcgcagacgggcaccggcaagaccgctgcattcggcctgccgatg
atcgaaaagctcgtcgccgacggcagacgtcccgatccgcgcaacatccgcgcgctcgtg
cttgcccccacgcgcgaactggtgaatcagatcgcgaccaacctgaagcttttcgtgaag
aagagcccgctcaagatcggcctcgtcgtcggcggcgtttcgatcaacaagcagaccgaa
cagctcgcccgtggcgtcgacattctcgtcgcgacccctggccgcctgctcgacctcgtt
tcgcgcaaggcggtgacgctgacccaggctcgctatctcgttctcgacgaggccgaccag
atgcttgacctcggcttcatccatgacctgcgcaagatttccaagctggtgccgaagaac
cgtcagacgctgctcttctccgcaaccatgcccaagctgattgccgagcttgccggcgaa
tacctgaccgacccggtcaaggtcgaagtctcgcctccgggcaaagccgccgacaaggtc
gaacaatatgtgcatttcgtccccggcaaggacctgaagacgacgatcctgaagcagacg
ctgactgccaatcccgatgggctgtcgctgattttcagccgcaccaagcatggcgccgag
aagctgatgaagcatctcgaccatgtcggcttcaaggccgcctcgatccatggcaacaag
agccagggtcagcgggagcgtgcgctgaaggcattccgcgacggtgagatccgcgtgctc
gtggcgacggacgtggccgcccgcgggatcgacattccgggcgtcacccacgtctacaac
tacgacctgccggaagtgcccgacgcctatgtgcaccgtatcggccgtacggcccgcaac
ggccgcgacggcatcgcgatcgccttctgcgcgccggacgaaatccgcctgctccgtgac
atcgaaaagctgatgggcatccagatcgctgtcgccagcggcgaagcgcccgccgaccag
gcccgcccctccaagggccgtggcggccgcggcaacggtcagcctcgcggcaatggcgca
ggacagcgccagggcggacctcgccgcgatcggccgcagcgccaggcggcagcgggcgga
ttcgccggcgacgacctgctgcgcgacgagcgctcgcacgagcgccgcgaccagcgcgct
gccgggcatggaccggcggacggaaggccggaaggccaccgcaatcacaaggcgcagaag
caccatgggcggcccggaccacagcaggccggccgccgcggaagcgaacagtccggcgaa
cgcaatggcggcggcaatcgaccgcagcgtgccgacggtcgcggccatcagcgctag
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