Streptomyces profundus: K4G22_01955
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Entry
K4G22_01955 CDS
T10233
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
sprf Streptomyces profundus
Pathway
sprf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sprf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
K4G22_01955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sprf03400
]
K4G22_01955
DNA repair and recombination proteins [BR:
sprf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
K4G22_01955
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
HC2
PGA28-like_dom
Motif
Other DBs
NCBI-ProteinID:
UED83111
LinkDB
All DBs
Position
complement(443348..444409)
Genome browser
AA seq
353 aa
AA seq
DB search
MRTIWKGSISFGLVTIPIKVVGATENHSVSFRQVHIADEGRIRYRKVCELDGEELAGDQI
GKAYQASDGTLVQISDDDLDAMPLPTARTVEILGFVPVGSIDPFQLDRSYYLTPDSGAAK
PYVLLREALRRSGQGAIAKLAMRGRETLALVRTREDEEVLGMHTLLWPDEIRSAQGLAPT
EQVTVRDAELDMADTLMDTLGEVDMSELRDEYRAAVETLVNAKLEGVEPPSLGAEAAGGG
RVVDLMAALEDSVRDARASRGEDEGADEGEDATVTDIGGRGGTRKATGRQAARKSTGTKG
ATKKGAAKKSTGTKSTAKKGAAKKGSGTKSTGKKSAAKKSTAKKSAASRKRAS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
gtgcgaactatctggaaagggtccatctccttcgggctggtcaccatccccatcaaggtc
gtgggcgcgaccgagaaccactcggtctcgttccgccaggtgcacatcgccgacgagggc
cggatccgctaccgcaaggtgtgcgagctggacggcgaggagctcgccggcgaccagatc
ggcaaggcgtaccaggcgtccgacggcaccctggtgcagatcagcgacgacgatctggac
gcgatgccgctgcccaccgcgcggaccgtggagatcctgggctttgtccccgtcggcagc
atcgaccccttccagctggaccgctcctactatctgacccccgacagcggcgcggccaaa
ccgtatgtgctgctgcgcgaggcgctgcggcgctcgggccagggcgccatcgccaagctg
gcgatgcgcggccgggagacgctcgcgctggtccgcacccgggaggacgaggaggtgctg
ggcatgcacaccctgctctggccggacgagatccgctcggcccaggggctggcccccacc
gagcaggtgaccgtgcgggacgccgagctggacatggccgacaccctgatggacaccctg
ggcgaggtggacatgtccgagctgcgggacgagtaccgggccgccgtggagacgctggtc
aacgccaagctggagggcgtggaaccgccgagcctcggagctgaggccgccggcggcggc
cgggtggtggacctgatggcggccctggaggacagcgtccgcgacgcccgcgcctcccgt
ggcgaggacgagggcgccgacgagggcgaggacgccacggtcaccgacatcggcggtcgg
ggcggcaccaggaaggccaccggccggcaggccgccaggaagagcaccggaacgaagggt
gccaccaagaagggcgcggccaagaagagcaccggaacgaagtccaccgccaagaagggc
gcggccaagaagggcagcggaacgaagagcacgggcaagaagagcgcggcgaagaagagc
acggccaagaagtccgccgcctcacgcaagcgcgcctcctga
DBGET
integrated database retrieval system
