Streptomyces profundus: K4G22_04330
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Entry
K4G22_04330 CDS
T10233
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sprf Streptomyces profundus
Pathway
sprf00040
Pentose and glucuronate interconversions
sprf01100
Metabolic pathways
sprf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sprf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
K4G22_04330
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K4G22_04330
Enzymes [BR:
sprf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
K4G22_04330
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
UED83528
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Position
complement(985294..986730)
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AA seq
478 aa
AA seq
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MSKERTSHRRSDTRSDSGPAGRSRLLPVAATVGCAALALVALPPHASAEEASFDELTSDA
ASTASFGSWPGSGHRLEQGVLPARDGWGSAEGGVTGGSGAPRERVFTVTDRGELADALAA
PGDGPRIIRVQGAIDANTDADGNALSCEDYATDGYSLDAYLDAYDPDTWGRDEEPSGPQE
DARLASAAVQKEQVVLSVPSHTTIVGAGSDARLLGATLDIRGVENVIVRNLTFEDTFDCF
PQWDPTDGEFGEWNSEYDSAVVYGSRHVWVDHNTFTDGRRPDADQPRYFGRLFQQHDGQL
DIVRGADLVTVSWNVFTDHDKTILLGNSDGAAADDRGKLRTTFHHNLFHNVNERAPRVRY
GQVDVYNNHYRQDAGVPYGYSWGIGIESALVAEYNAFTLPAEITPDRAIYQWTANTGMTE
HGNRVNGRSVDLLGAFQAANPEHTLGDDAGWRPELRRVVHHPLLLPLLLDIHAGAGRL
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagagagaacctctcaccgcagatccgacaccagatccgacagcggaccagcc
ggtaggtcccggctgctgccggtggcagcgacggtcggttgcgccgcactcgcgctggtc
gccctgccgccgcacgcctccgccgaggaggcgtcgttcgacgagctgacgtccgacgcc
gcctccaccgcctcgttcgggtcctggccgggctccgggcaccgcctggagcagggcgtg
ctgccggcacgcgacggctggggctcggcggagggcggggtcaccggcggatccggtgcg
ccgcgcgagcgggtcttcaccgtcaccgaccgcggtgagctggccgacgccctcgccgcc
ccgggcgacgggccccggatcatccgtgtccagggcgccatcgatgccaacaccgacgcc
gacggcaacgcgctgagctgcgaggactacgccaccgacggctacagcctggacgcctac
ctggacgcctacgaccccgacacctggggtcgcgacgaggagccaagcgggccgcaggag
gacgcccgcctcgcctcggcggcggtgcagaaggaacaggtggtgctctccgttccctcc
cacaccaccatcgtgggggcggggtccgacgcccggctgctgggcgccacgctggacatc
aggggcgtcgagaacgtcatcgtccgcaacctgacgttcgaggacaccttcgactgcttc
ccccagtgggaccccaccgacggtgagttcggcgagtggaactcggagtacgacagcgcg
gtggtgtacggctcccgccatgtctgggtggaccacaacacgttcaccgacggccgtcgc
cccgacgccgaccagccgcgttacttcgggcggctgttccagcagcacgacggccagctc
gacatcgtgcgcggcgccgatctggtgacggtcagctggaacgtgttcaccgaccacgac
aagacgatcctgctcggcaactccgacggcgccgccgccgacgaccggggcaagctgcgc
accaccttccaccacaacctcttccacaacgtcaacgagcgtgcgccgcgcgtccgttac
gggcaggtggacgtctacaacaaccactaccggcaggacgcgggcgttccctacggctac
agctggggcatcggcatcgagtcggcgctggtcgccgagtacaacgccttcacgctgccc
gccgagatcactccggaccgggccatataccagtggaccgcgaacaccggcatgaccgag
cacgggaaccgggtcaacgggcgctccgtcgatctgctgggcgccttccaggcggccaac
ccggagcacaccctcggcgacgacgccggctggcgtcccgagttgcggcgcgtggtgcac
cacccgctgctgctgcccctgctgcttgacatccacgccggagccggccgactgtga
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