Streptomyces profundus: K4G22_08905
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Entry
K4G22_08905 CDS
T10233
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sprf Streptomyces profundus
Pathway
sprf03420
Nucleotide excision repair
sprf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sprf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K4G22_08905
03430 Mismatch repair
K4G22_08905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sprf03400
]
K4G22_08905
Enzymes [BR:
sprf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K4G22_08905
DNA repair and recombination proteins [BR:
sprf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K4G22_08905
MMR (mismatch excision repair)
Other MMR factors
K4G22_08905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UED84310
LinkDB
All DBs
Position
complement(2093449..2096862)
Genome browser
AA seq
1137 aa
AA seq
DB search
MPAPLSDPRQLSELLGIPFTPEQLACATAPAAPQAIVAGAGSGKTTVMAARVVWLTGTGR
IAPDRVLGLTFTNKAAGELAERVRTALAKARIDTSETGEPTISTYHAFAGRLLTEHGLRL
GIEPASRLLADAGRFQLAAEVLRGAPADFEPPSPSFTTLVTDLVALDGELSEHLVPPERL
RSFDGELLAELAEARLTNAALRQVPRAAEGRLALLGLVEEYRARKRARDLLDFGDQIALA
AALARERPEVGQALREQFGVVLLDEYQDTSVAQRVLLAGLFGDGTGHPVTAVGDPCQGIY
GWRGASVANLDDFPEHFAAAEGVPARVLRLSQNRRSGGRLLTLANALAAPLRERHPSVAP
LRPAEDAEGAGLVRCALLPTHAEELAWLADAVAHQVRTGTEPGEIAVLCRTASDFPLIQS
ALVARDVPVEVVGLSGLLHLPEVADLVAVCEVLADPTANAALVRLLTGPRWRIGPRDLAL
LGRRARLLVRRVRAGEADAPGGEAAALARLADAVAGTDPAEVVSLADALDTFVGSGGGSG
ADPGSAEPDDRLPFSPEARVRFAHLAAELRDLRRSLGDPLMDVLHRVLTHTGLDVELSAS
PMALAARRRETLGAFLDVAASFAAGRAGTAVHGDATLSAFLGFLRAAESFDRGLDGSLPS
GGNAVQVLTAHKAKGLEWDVVAVPGLCAGLFPAVRSRDSWLRQARTLPHPLRGDAETLPP
TPEWTAAGYKRYLAETAGELELEELRLGYVAVTRPRRLLLGSGHWWGPSQKKRRGPSDFL
TALREHCERDPGHGEVEHWAEPPPEEAENPALARDEEELAWPLPLDSEALARRREAALAV
LSRLHRMPSPRPDEPDGTPPDDEPPPDEFPPDEPPPDEFPPDEPSPDGLSSDELTPEERR
TMASWDRDLTVLASELRQARAGVREVPLPVSLSATQLQRLATDPDGFARELARPMPRPPQ
PAARRGTRFHAWVESRFDSVPLPMLGPEELPGGDPDEDAEIRDERELAALKQAFQRTPYA
DRRPYRIEAPFQLTLAGRVIRGRIDAVYRLPPRRGSDSERWEIIDWKTARRQDADPLQLA
IYRLAWAERHQLPLSEVTAAFLYVRSGELVRPSVLPGRRGLERLLMGEDSWEPNDPG
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
gtgccagcgccactcagcgatccccggcagctcagcgagctattggggatcccgttcacc
ccggagcagctggcctgcgccaccgcgccggcggcgccgcaggccatcgtcgccggcgcc
ggctcggggaagaccacggtgatggcggcccgcgtcgtctggctcaccggcaccggacgg
atcgcccccgaccgggtgctcggcctcacgttcaccaacaaggccgccggcgagctggcc
gaacgcgtccgcaccgcgctcgccaaggcccggatcgacacctccgagacgggcgagccc
accatctccacctaccacgccttcgccggccggctgctcaccgagcacgggctgcggctc
ggcatcgagcccgcctcccggctgctcgccgacgccggcaggttccagctggcggccgag
gtgctgcgcggcgcccccgccgacttcgagccgccgagccccagcttcaccaccctcgtc
accgacctggtggcgctggacggcgagctgtccgaacatctggtcccccccgagcggctg
cgctccttcgacggggagctgctcgccgagctggccgaggcccggctcaccaacgccgcc
ctgcggcaggtgccgcgggcagccgaggggcgcttggcgctgctcggcctggtcgaggag
taccgcgcccgcaaacgcgcccgcgacctgctggacttcggcgaccagatcgcgctggcc
gcggccctggcccgggagcggcccgaggtcggccaggcgctgcgcgaacagttcggcgtg
gtcctgctggacgagtaccaggacacctccgtcgcccaacgcgtgctgctcgcagggctc
ttcggcgacggcacgggccatccggtcaccgccgtcggggacccctgccaggggatctac
ggctggcgcggcgcctcggtcgccaacctggacgacttccccgagcacttcgccgccgcc
gaaggggtcccagcccgggtgctgcggctcagccagaaccgccgcagcggcggccggctg
ctcaccctcgccaacgccctggccgcgccgctccgcgagcgacacccgtccgtcgccccg
ctgcgcccggccgaggacgcggagggcgccggtctggtccgctgcgcgctgctgcccacc
cacgccgaggagttggcctggctggccgacgccgtggcccatcaggtccgcaccggcacg
gagcccggcgagatcgccgtgctctgccgcaccgcgagcgacttcccgctgatccagagc
gcgctggtcgcgcgggacgtgccggtcgaggtggtcggcctctccgggctgctgcacctt
cccgaggtcgccgatctggtcgcggtctgcgaggtgttggccgatcccacggccaacgcg
gccctggtccggctgctcaccgggccgcgctggcggatcgggccgcgcgatctggcgctg
ctgggccggcgggcccggctgctggtccgccgggtgcgcgccggggaggcggacgctcct
ggcggcgaggccgccgcgctggcccggctggccgacgcggtcgccggcaccgacccggcc
gaggtggtctcgctggccgacgcgctcgacaccttcgtcggcagcggcgggggctccggc
gccgatcccggctcggccgagcccgacgaccggctgccgttctcgcccgaggcccgcgtc
cggttcgcccacctcgccgccgagctgcgcgatctgcgccgctcgctgggcgatccgctg
atggacgtgctgcaccgggtgctcacccacacggggctcgacgtcgagctgtccgcctcg
ccgatggccctggccgcccgccgccgggagacgctcggcgcgttcctcgacgtggcggcg
agcttcgccgcgggccgtgccggcaccgccgtgcacggcgacgccaccctctcggccttt
ctcggcttcctgcgcgcggccgagagcttcgaccgcggcctggacggctcgctgcccagc
ggcggcaacgcggtgcaggtgctgaccgcgcacaaggccaagggtctggagtgggacgtg
gtcgcggtgccgggcctgtgcgccggcctcttccccgccgtccgctcccgggactcctgg
ctgcggcaggccagaacgctcccgcacccgctgcgcggcgacgccgagacgctgccgccc
acccccgagtggaccgccgccggctacaagcggtatctggccgagaccgccggcgagttg
gagcttgaggagctccgcctcggctatgtcgcggtcacccggccacgccggctgctgctc
ggctccggacactggtgggggcccagccagaagaagcggcgcggcccctccgacttcctg
accgcgctgcgcgagcactgcgagcgcgatccggggcacggcgaggtcgagcactgggcc
gagccgccgcccgaggaggcggagaacccggcgctcgccagggacgaggaggagctggcc
tggccgctgcccctggacagcgaggcactggcccgccgccgcgaggcggccctggcggtc
ctgtcccgcctgcaccggatgccgtccccacgccccgacgagccggacggtacgcctccg
gacgacgagccgccgccggacgagttcccgcccgatgagcccccgccggacgagttcccg
ccggacgagccctcgccggacgggctttcgtccgacgagctgaccccggaggagcgccgc
accatggcctcctgggaccgggacctgacggtgctggcgagcgagctgcggcaggccagg
gcgggggtgcgggaggtgccgctgcccgtctcgctctcggcgacccagctccagcggctg
gccaccgacccggacggcttcgcccgcgagctggcccgccccatgccccgcccgccccag
ccggccgcccgccggggcacccgtttccacgcctgggtggagtcccgcttcgactcggtg
ccgctgcccatgctcggccccgaggagttgcccgggggcgatcccgacgaggacgcggag
atccgcgacgaacgtgaactggcggcgctcaagcaggcgttccagcgcacgccgtacgcc
gaccggcgcccctaccggatcgaggccccgttccagctcaccctcgccgggcgggtgatc
agggggcggatcgacgccgtctaccgcctgccgccccgccggggatcggacagcgagcgc
tgggagatcatcgactggaagaccgcgcgccgccaggacgccgacccgctgcaactggcg
atctaccgcctcgcctgggccgagcgccaccaactgccgctgagcgaggtcaccgctgcc
ttcctctatgtgcgcagcggcgagctggtgcgccccagcgtgctgcccgggcgccggggt
ctggagcggctgctgatgggggaggactcctgggagcccaacgatcccggttag
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