Streptomyces profundus: K4G22_10330
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Entry
K4G22_10330 CDS
T10233
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sprf Streptomyces profundus
Pathway
sprf03420
Nucleotide excision repair
sprf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sprf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K4G22_10330 (pcrA)
03430 Mismatch repair
K4G22_10330 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sprf03400
]
K4G22_10330 (pcrA)
Enzymes [BR:
sprf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K4G22_10330 (pcrA)
DNA repair and recombination proteins [BR:
sprf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K4G22_10330 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
K4G22_10330 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
UED84552
LinkDB
All DBs
Position
complement(2413198..2415690)
Genome browser
AA seq
830 aa
AA seq
DB search
MSGLFDDSALADLDPTPDEEPPPEPEDPAGGADPGGVPDDLFAGTFAGSRAMAAEDAYYR
DGARKPIGDPAALLEGLNEQQREAVTHSAGPLLIVAGAGSGKTRVLTHRIAYLLSARGAH
PGQILAITFTNKAAGEMRERVEELVGPRANAMWVMTFHSACVRILRRESKQLGFTSSFSI
YDAADSKRLMALVCRDLELDPKRFPPKSFSAKVSNLKNELIDPEDFAVQAAGGASQGESG
GSFEKTLAEVYTMYQARLREANALDFDDIIMTTVHLLQAFPDVAEHYRRRFRHILVDEYQ
DTNIAQYTLIRQLVGEPGGAVEPAELCVVGDADQSIYAFRGATIRNILQFEQDFPQAGTL
LLEQNYRSTQTILTAANAVIARNEDRRPKNLWTNEGGGARIVGYVADTEHDEAQFVADEI
DRLTDAGDARPGEVAIFYRTNAQSRVFEEVFIRVGLPYKVVGGVRFYERREVRDVLAYLR
VLANPEDTVPLRRVLNVPKRGIGDRAEAMIEALALRERISFAQALRRVDEAYGMAARSAN
AVRRFNTLLEELRTVAESGAGPATVLEAVLERTGYLAELQSSTDPQDETRVENLQELAAV
ALEFEQERAQAEEASPGTLADFLERVALVADSDEIPDEADAGGVITLMTLHTAKGLEFPV
VFLTGLEDGVFPHMRSLGKTKELEEERRLAYVGITRARQRLYVTRSALRSAWGQPQHNPP
SRFLEEIPEEHLDWRRTGPLVRQEPPSAGSAALGVGRGGRRVGAGGFATGRMADRPVVAL
APGDRVTHDSFGMGTVVAVQGEGDRAEASIDFGGEKPKRLLLRYAPVEKL
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcctcttcgatgacagcgcactggcggacctcgaccccactccggacgaggag
ccgccgcccgagcctgaggacccggcgggtggcgccgatcccgggggcgtgccggacgat
ctcttcgccggcaccttcgccggctcacgcgccatggccgccgaggacgcctactaccgc
gacggcgcgcgcaagccgatcggtgatccggccgcgctgctggagggcctcaacgaacag
cagcgcgaggccgtcacccacagtgccggcccgctgctgatcgtcgccggcgcgggttcg
gggaagacccgggtgctcacccaccgcatcgcctatctgctctccgcgcgcggcgcgcac
cccgggcagatcctcgcgatcacgttcaccaacaaggccgccggcgagatgcgggagcgc
gtcgaggagttggtcggtccgcgcgccaacgcgatgtgggtgatgacgttccacagcgcc
tgtgtgcggattctgcgccgggagagcaagcagctggggttcacctccagtttctccatc
tatgacgcggcggactccaagcggctgatggccctggtctgccgtgatctcgagctggac
cccaagcgcttcccgcccaagtccttcagcgccaaggtgtccaacctcaagaacgagctg
atcgacccggaggacttcgccgtccaggcggccgggggcgcctcccagggggagtccggg
ggcagcttcgagaagacgctggccgaggtgtacacgatgtaccaggcgcggctgcgcgag
gccaacgcgctggacttcgacgacatcatcatgaccacggtccatctgctccaggcgttc
cccgatgtcgccgagcactaccgccgccgcttccggcacatcctggtggacgagtaccag
gacaccaacatcgcccagtacacgctgatcaggcagctggtgggggagccgggcggggcg
gtcgagccggcggagctctgtgtggtgggcgacgcggaccagtcgatctacgccttcagg
ggcgccaccatccgcaacatcctccagttcgagcaggacttcccgcaggcaggcaccctg
ctgctggagcagaactaccgctccacccagacgatcctgacggccgccaacgcggtgatc
gcccgcaacgaggaccgccgcccgaagaacctctggaccaacgagggcggcggcgcccgg
atcgtcggctatgtcgcggacacggagcatgacgaggcccagttcgtcgccgacgagatc
gaccggctgacggacgcgggggacgccaggccgggcgaggtggcgatcttctaccgcacc
aacgcgcagtcccgggtcttcgaggaggtcttcatccgcgtcggcctgccctacaaggtc
gtcggcggcgtccgcttctacgagcggcgcgaggtcagggatgtgctggcctatctgcgg
gtgttggccaacccggaggacacggtcccgctgcggcgcgtcctgaacgtgcccaagcgc
ggcatcggcgaccgggccgaggcgatgatcgaggcgttggcgctgcgcgagcggatctcc
ttcgcccaggcgctgcgccgggtggacgaggcgtacgggatggccgcgcggtcggccaac
gcggtccggcggttcaacacgctgcttgaggagctgcgcacggtggcggagtccggtgcg
ggcccggccaccgtgctggaggcggtgctggagcgcacgggctatctggcggagttgcag
tcctccaccgatccccaggacgagacccgggtggagaacctccaggagctcgcggccgtc
gccctggagttcgagcaggagcgcgcccaggcggaggaggcgtcccccggcacgctggcc
gacttcctggagcgggtcgcgctggtcgccgactccgacgagatcccggacgaggcggac
gccggcggcgtgatcacgctgatgacgctgcacaccgcgaagggccttgagttcccggtg
gtgttcctgaccggcctggaggacggcgtcttcccgcacatgcgctcgctcggcaagacc
aaggagctggaggaggagcggcggctcgcctatgtcgggatcacgcgcgcccgccagcgt
ctctacgtcacgcgctccgcgctgcgcagcgcctggggccagccgcagcacaacccgccg
tcccgttttctggaggagatccccgaggagcatctggactggcggcgcaccggtccgctg
gtgcggcaggagccgccgtccgccggttcggccgcgctcggcgtcggccgtggcggccgg
cgtgtcggggcgggcggcttcgccacggggcggatggcggaccggcccgtggtggcgttg
gcgccgggggatcgggtgacgcacgacagcttcggcatggggacggtcgtcgccgtgcag
ggcgagggcgatcgggccgaggcgtccatcgacttcggcggcgagaagccgaagcggctg
ctgctgcgctacgcccccgtggagaagctctga
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