Streptomyces profundus: K4G22_14105
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Entry
K4G22_14105 CDS
T10233
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sprf Streptomyces profundus
Brite
KEGG Orthology (KO) [BR:
sprf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sprf03021
]
K4G22_14105
Transcription machinery [BR:
sprf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K4G22_14105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
MarR_2
HTH_3
MarR
DUF7343
HTH_37
HTH_5
Motif
Other DBs
NCBI-ProteinID:
UED85189
LinkDB
All DBs
Position
3267267..3268049
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AA seq
260 aa
AA seq
DB search
MAVTRSKGAGARVLTQSLCERLARLETGTAEHSRVRDTLVEANLPLVRYAALRFHSRNEP
MEDIVQVGTIGLIHAVDRFDPTRGVQFATFALPTIVGEIRRHFRDSVRAVHVPRRLHELW
ARVCAAAEELTTALGRSPTTAELAERLRLSEEDVVASMDAGRAYRVSSLEATRDREEGSP
ALVDRLGYEDPGLADVEHRALIRHLLVQLPEREQRILLLRYYRNLTQSQISAELGLSQMH
ISRLLARSFSRLRSANPIEK
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
gtggcggtgacgcggtccaaaggcgccggagcccgcgtgctcacgcagtcgctctgcgaa
cggctggcccggctcgaaacgggcaccgccgagcactccagggtgcgggacaccctcgtc
gaggccaacctgccgctggtccgctacgccgcactccgcttccacagtcgcaacgaaccg
atggaggacatcgtccaggtcggcaccatcggcctgatccatgccgtcgaccgcttcgat
ccgacgcgcggcgtgcagttcgccaccttcgcgctgcccaccatcgtgggcgagatccgc
aggcacttccgggacagcgtgcgagcggtccatgtgccccgacggctgcacgagctgtgg
gcgcgggtctgcgccgcggccgaggagctgacgacggcgctgggccggtcgcccaccacc
gcggagttggccgagcggctgcggctctccgaggaggacgtggtggcgagcatggacgcc
ggcagggcgtaccgggtctcctccctggaggccaccagggaccgcgaggagggctcaccc
gcgctggtcgaccggctcgggtacgaggatccgggtctcgccgatgtcgagcaccgcgcg
ttgatccgacatctgctggtgcaactgcccgagcgcgagcaacgcatcctgctgttgcgc
tactaccgcaatctgacgcagtcgcagatcagcgcggagctcggactttcgcagatgcac
atctcccggctgctggcccgcagcttcagcaggctgcgttccgcaaacccgatcgagaag
taa
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