Streptomyces profundus: K4G22_17175
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Entry
K4G22_17175 CDS
T10233
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
sprf Streptomyces profundus
Pathway
sprf03420
Nucleotide excision repair
Brite
Enzymes [BR:
sprf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K4G22_17175
Transcription machinery [BR:
sprf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
K4G22_17175
DNA repair and recombination proteins [BR:
sprf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
K4G22_17175
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UED85713
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Position
complement(3921167..3922816)
Genome browser
AA seq
549 aa
AA seq
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MSCLIVQSDKTLLLEVDHEQAEACRRAIAPFAELERAPEHIHTYRVTPLGLWNARAAGHD
AEQVVDALVRYSRYPVPQSLLVDVAETMARYGRLSLVKHPTHGLVLTATDRPVLTEVLRS
KRIQPLVGARIDDDTVAVHPSERGQIKQVLLKLGWPAEDLAGYVDGEAHPIALCEDGWSL
RPYQRQAIDGFWHGGSGVVVLPCGAGKTLVGAGAMATASSTTLILVTNTVSARQWKSELV
RRTTLTEDEIGEYSGTRKEIRPVTIATYQVLTTKRKGVYPHLELFDSRDWGLILYDEVHL
LPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWREIEAQGYIAPAD
CVEVRVDLSESERLAYAMAEPEERYRFCATTDAKRRVAEDLVRLHEGAQTLVIGQYIDQL
DELGEQLNAPVIKGETTNAKREQLFNAFRSGEVRVLVVSKVANFSVDLPEATVAIQVSGT
FGSRQEEAQRLGRVLRPKADGHEARFYSVVARDTIDQDFAAHRQRFLAEQGYAYRIVDAS
DLPSDERPA
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctgcttgatcgtgcagagcgacaagacgctgctgctggaggtggaccacgagcag
gccgaggcctgccggcgtgccatcgcgccgttcgccgagctggagcgggcgcccgagcac
atccacacctaccgggtcaccccgctcggcctgtggaacgcgcgcgccgccgggcatgac
gcggagcaggtggtggacgcgctggtgcgctactcgcgctatccggtgccgcagtcgctg
ctggtggacgtggcggagacgatggcccgctacggccggctgagcctggtgaagcatccg
acgcacgggctggtgctgacggcgaccgaccgtccggtgctcaccgaggtgctgcggtcg
aagcggatccagccgctggtgggggccaggatcgacgacgacacggtggcggtgcatccg
tccgagcgcgggcagatcaagcaggtgctgctgaagctcggctggccggcggaggatctg
gccggctatgtggacggcgaggcgcaccccatcgcgctgtgcgaggacggctggtcgctc
cgcccctaccagcggcaggccatcgacggcttctggcacggcggctccggcgtggtggtg
ctgccgtgcggcgccggcaagacgctggtgggcgcgggggcgatggcgaccgcctcgtcg
acgacgctgatcctggtcaccaacacggtctcggcgcggcagtggaagtccgagctggtg
cggcgcaccacgctgaccgaggacgagatcggcgagtacagcggcacccgtaaggagatc
cgcccggtcaccatcgccacctaccaggtgctgaccaccaagcggaagggcgtctatccg
catctggagctgttcgactccagggactgggggctgatcctctacgacgaggtgcatctg
ctgccggcgccggtcttcaagttcaccgccgacctccaggcccgccggcggcttgggctg
accgcgacgctggtgcgcgaggacggccgcgagtcggacgtgttctcgctgatcggcccc
aagcggttcgacgcgccgtggcgggagatcgaggcgcagggctatatcgcgccggccgac
tgtgtcgaggtgcgggtggatctgagcgagtcggagcggctggcctatgcgatggcggag
ccggaggagcggtaccggttctgcgccaccacggacgccaagcgccgggtcgcggaggac
ctggtgcggctgcacgagggggcgcagaccctggtgatcggccagtacatcgaccaactc
gacgagttgggcgagcagttgaacgcgccggtgatcaagggcgagacgaccaacgccaag
cgggagcagctcttcaacgccttccgttccggcgaggtgcgggtgctggtggtgtccaag
gtggccaacttctcggtcgacctgccggaggcgacggtcgccatccaggtctccggcacc
ttcgggtcccggcaggaggaggcgcagcgcctgggccgggtgctgcggcccaaggccgac
gggcacgaggcgcggttctactcggtggtcgccagggacaccatcgaccaggacttcgcg
gcgcaccggcagcggttcctggccgagcagggctacgcctaccggatcgtggacgcgtcc
gacctcccgtccgacgagcggccggcgtag
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