Streptomyces profundus: K4G22_25300
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Entry
K4G22_25300 CDS
T10233
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sprf Streptomyces profundus
Pathway
sprf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sprf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K4G22_25300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sprf03000
]
K4G22_25300
03400 DNA repair and recombination proteins [BR:
sprf03400
]
K4G22_25300
Enzymes [BR:
sprf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
K4G22_25300
Transcription factors [BR:
sprf03000
]
Prokaryotic type
Helix-turn-helix
AraC family
K4G22_25300
DNA repair and recombination proteins [BR:
sprf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K4G22_25300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
UED87112
LinkDB
All DBs
Position
5801096..5802550
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AA seq
484 aa
AA seq
DB search
MDDDSRYEAVRSRDERFDGVFFTAVLTTGIFCRPSCPATTPKRANVRFLASAAAAQGAGF
RACRRCRPDAVPGSAEWNVRADLVGRAMRLIGDGVVDREGVAGLAGRLGYSTRQVQRQLV
AELGAGPIALARAGRAHTARVLLQTTELPITEIAFAAGFTSVRQFNDTLRDAYDRTPSAL
RAAAPAAGRAEPVEGAGVPLRLAYRGAYAARQVFDFLARRALPGVEETLGAPGARVYRRT
LALPHGGGIAEVAESAGAPGRRWLPCRLYLSDLRDLTCAVQRLRRLFDLDADPYAVAERL
GGHPRLGPLVAKAPGLRSPGAVSSDELAIRAVLGQQVTVGAARTLGGRLVAALGKPLGRP
DGGLTHLFPEPAALAEAELAELGMPAARRATLRTLGAALADGRVQLSPGADRDEAERRLR
ALRGIGPWTAGYVRMRALGDPDVFLPGDAAVRHGLAAIGATVDESEEWRPWRSYALHHLW
WAIA
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgacagcaggtacgaggcggtgcgcagccgcgacgagcgattcgacggggtg
ttcttcaccgccgtcctgaccaccgggatcttctgccgtcccagctgcccggcgaccacg
cccaagcgggccaacgtccgcttcctcgcctcggccgcggcggcgcagggcgcgggcttc
cgggcctgccgtcgttgccgccccgacgccgtgccgggatcggccgagtggaacgtcagg
gccgacctggtcggccgggcgatgcggctgatcggggacggcgtggtcgaccgggagggc
gtcgcgggcctggccggccggctcggctacagcacccggcaggtccagcggcagctggtc
gccgagctgggggccgggcccatcgcgctggccagggccgggcgggcccacaccgcgcgg
gtcctgctccagacgaccgaactgccgatcaccgagatcgccttcgccgccggcttcacc
agcgtccgccagttcaacgacaccctgcgcgacgcctatgaccgcacccccagcgcgctg
cgcgccgccgcccccgcggccggccgcgccgagcccgtcgagggcgccggcgttccgctg
cggctcgcctaccggggggcctacgccgcgcggcaggtcttcgacttcctcgcccgccgg
gcgctgccaggcgtggaggagacgctcggcgcgccaggcgcccgcgtctaccggcgcacg
ttggcgctgccgcacggcggcggcatcgccgaggtggccgagagcgccggcgccccgggc
cgccgctggctgccctgccggctgtacctcagcgatctgcgcgatctgacctgcgccgtc
cagcgcctgcgtcgcctcttcgacctggacgccgacccctacgcggtggccgagcggctc
ggcggccatccacggctcgggccgctggtcgcgaaggcgccggggctgcgttcgcccggc
gccgtcagctccgacgaactggcgatccgggcggtgctcggccaacaggtcacggtgggc
gcggcccgcaccctgggcggccggctggtcgccgcgctgggcaagccgctggggcggccc
gacggcggcctcacccatctcttcccggagccggcggcgctggccgaggccgaactcgcc
gaactcggcatgccggccgcgcgccgcgccaccctgcgcaccctgggcgccgcgctcgcc
gacggccgcgtccagctcagcccgggggccgaccgggacgaggccgagcggcggctgcgc
gcgctgcgcggtatcggcccctggacggccggctatgtgcggatgcgggccctgggcgac
ccggatgtcttcctgccgggggacgccgccgtccgccacgggctggccgcgatcggcgcg
acggtcgacgagtcggaggagtggcgcccctggcgctcctacgccctgcaccatctgtgg
tgggccatcgcctga
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