Streptomyces profundus: K4G22_29450
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Entry
K4G22_29450 CDS
T10233
Symbol
selB
Name
(GenBank) selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
sprf Streptomyces profundus
Brite
KEGG Orthology (KO) [BR:
sprf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sprf03012
]
K4G22_29450 (selB)
Translation factors [BR:
sprf03012
]
Eukaryotic type
Elongation factors
K4G22_29450 (selB)
Prokaryotic type
K4G22_29450 (selB)
SSDB
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Paralog
GFIT
Motif
Pfam:
GTP_EFTU
WHD_3rd_SelB
Beta-barrel_SelB
MMR_HSR1
GTP_EFTU_D2
RsgA_GTPase
ABC_ATPase
Motif
Other DBs
NCBI-ProteinID:
UED87817
LinkDB
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Position
complement(7053003..7054874)
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AA seq
623 aa
AA seq
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MTPHREAAAPPAPSFVFATAGHVDHGKSTLLRALTGSDPDRLAEERRRGLTLDLGFVWTT
APSGRTLAFVDVPGHHRYLATAFAGVATAPAVLLVVSADEGWRPQTEEHLLALDAFGVRA
GLLVVTRADLADPADALAEARARTAGTGLAEAPALAVSARTGAGLDALRERLDALASAHR
APAPDAPVRLWLDRAFTVAGAGTVVTGTLTAGTLAVGDTLELAPAGTPAVVRGLHSLGQR
VARVAGPARVAVNLRGIAATSVRRGHALITPESWWRTDTVDVRLAHRTAPPEAPPRQGPR
LPAEPLVHCGTAQTGARLRPLGELAARLTLRVPLDLRVGDRLLVRDPGSRLLLGATVLDV
DPPALRRRGSAAERGRRLAQLAEPADTAARLRADGLARRARLTAMGYPLDTVPEARTAGP
YLLDAGRLEGLRTALGDEVDAYAAAHPADPGLPSTVARRRLALPDDLPLAALAEDGLTVR
DGRVYRARDAERLPAPVAAALDGLLADLTEAPFRAPTRERLEALGLTADALALLVRRGRL
ERIGTLHLPSGARARAAARLRALPQPFTVGDAARALATSRRVAVPLLEALDAEGSTHRHP
DGRRTTPEGPVRDGGRSGPRPAP
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgcaccgggaagccgccgcaccgcccgccccctccttcgtgttcgccaccgcc
gggcatgtggaccacggcaagtcgacgctgctgcgcgcgctcaccggcagcgaccccgac
cgcctcgccgaggagcggcggcgcggcctcacactcgacctgggcttcgtctggaccacc
gcgcccagcggccggacgctcgccttcgtggacgtgccgggccaccaccgctatctggcc
accgcgttcgccggggtcgccaccgcgccggccgtgctgctggtggtctcggccgacgag
ggctggcgcccgcagaccgaggaacacctcttggccctcgacgcgttcggggtgcgcgcc
ggactgctcgtggtgaccagggcggatctcgccgacccggccgacgcgctcgccgaggca
cgggcgcggacggccggcaccgggctcgccgaagcccccgcgctcgcggtgagcgcccgc
accggagcggggctcgacgcgctgcgggaacggttggacgcgctggcgtccgcgcaccgg
gcgccggcccccgacgctccggtgcggctctggctggaccgggcgttcacggtcgccggc
gccggcacggtggtgaccggcaccctcaccgccggcacgctcgcggtgggcgacaccctg
gagctcgcgccggccggcaccccggccgtcgtgcggggcctgcactccctcggccaacgc
gtcgcccgggtggcggggcccgccagggtcgccgtcaacctccgtggcatcgccgccact
tcggtgcgcaggggccatgccctgatcaccccggagagctggtggcgcaccgacaccgtg
gacgtccgcctcgcacaccggaccgcgccgcccgaggcgccgccccgtcaggggccacgg
ctgcccgccgaaccgctggtgcactgcggcaccgcccagaccggtgcccggctccggccg
ctcggcgagctggccgcgcgcctcaccctccgggtgccgctggatctgcgggtcggggac
cggctgctggtgcgcgacccgggatcgcggctgctgctgggcgccaccgtgctcgatgtg
gacccgcccgcgctgcgccgccggggctcggccgccgagcgtggccgccggctggcgcag
ctcgccgaaccggccgacaccgccgccaggctgcgcgccgacgggctcgcccgccgcgcc
cgactcaccgcgatgggctacccgttggacaccgtgcccgaggcgcggacggccgggccc
tatctgctcgacgccgggcgtctggaggggttgcgcaccgcgctgggcgacgaggtcgac
gcgtacgccgccgcccacccggccgaccccgggctgccgtcgacggtggcccgacgtcgc
ctggcgctccccgacgacctgccgctggccgccctggccgaggacgggctgaccgtccgc
gacggcagggtctaccgcgcgcgggacgcggaacggctgccggcgccggtggccgccgcc
ctggacgggctgctcgccgatctgacggaggcgccgttccgcgccccgacccgggagcgg
ctcgaagcgctcggcctgaccgccgacgcgctggcgctgctggtgcggcgcggccggctg
gagcggatcggcacgctccatctcccgagcggcgccagggcccgagccgcggcgcgactc
cgcgcgctgccccagccgttcaccgtcggcgacgcggcccgcgcgctggccaccagccgc
cgggtcgcggtgccgctgctggaggccctggacgccgaaggcagcacccaccgccacccc
gacggccgccgcaccaccccggaagggccggtcagggacggcggccgtagcgggccccgg
cccgctccgtga
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