Streptomyces pristinaespiralis: SPRI_0037
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Entry
SPRI_0037 CDS
T04073
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
spri
Streptomyces pristinaespiralis
Brite
KEGG Orthology (KO) [BR:
spri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spri03400
]
SPRI_0037
DNA repair and recombination proteins [BR:
spri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SPRI_0037
Archaeal homologous recombinant proteins
SPRI_0037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
AAA_27
ABC_tran
DUF1940
AAA_15
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ALC18343
UniProt:
A0A0M3QGT1
LinkDB
All DBs
Position
complement(51311..54664)
Genome browser
AA seq
1117 aa
AA seq
DB search
MRPVRLELNGFAGFRAPTVVDFTNADYFALVGPTGSGKSTVLDALTFALYGSAYRWGRSN
AIAYALAPTSNRCTVSLTFDVASQRYQVAREVRRVGQQIQQKTVSLVKFADPTAVVTDAD
GPQPEVLAGEIKELNAAIEQLLGLSFDDFCQCVVLPQGDFARFLSANARDRQQILLKLLG
AAHYEGIGKRAGAQAAEAAKEIAVLTDQLSRHADATPQAEADAQARLSALGQLAATVDQL
VPRVAEAHSRADDAHARVATLRTELARLTPLRTPDGIGELQRRAVEAQTAAHKARDAADA
AAQTLADATKAAQSGPQRAVLNIARDRYTEKAGLAGRRDAVIAAAQRARQELAQSEERLR
ALADAVTKARRTAEETRGRRDRVQQAYAALQRRQQMLAPVRTPDGASDLTSRAAALARQA
DAAATQLAAARDRHNQSASALTAAGDGSRLTEAREVLDQLLHVTSSLTDATSELDDAVEA
VAQADSAVTGAQVRLDAATAALEEARTLAGAAQLRPQLQVGHACPVCEQSVTILPPPLSD
PALAAAQAARDAAVREHRDLLSQRQAATRTVAAKQRAADTLTQRRTLLDERLGTLLPDRP
ADTERDCDADRAHLDERAAARDQLVAAEQQARAAVQEAEAAHTSATAAVATLQREIDRTR
SGLHTQLGALAELDPPAVDTHDVTAAWSDLQAWAQAQRSTVEDDLSAAQAEAATSHQAHQ
DATATLEVAEQAHATAHSVHTIAVQQSAAADHAQSTLTDRLSELQTLLDQAPPADALPGL
LEECDRLEAAVETATAEASQTREALKAAEAEQQQWQARTATAWSELTAARDAVAALKPPS
LDTDDLAAAWASLAAWAIRAADDRQADTLRAQADAHTAHSEADQLLGQLEGLLRDHDLDP
QDLGDGSERAAQAPRVVAVAAERARGRVEMIQRSLADAAAIQDKIDSARTQQQVAAELAR
LMRSNKFPQWLADSALDILVAGASQSLRRLSGDRFDLSHHKGEFYVIDHSDADSQRSVRT
LSGGETFQASLSLALALSDQLAGMGGATKLESIFLDEGFGTLDPDSLEMVADTLENLAQG
ERMVGVITHVTGLAERVPVRFQVHRDPHTSVVTREGT
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccgttcgcctggagctcaacggcttcgccggtttccgcgctcccaccgtggtc
gacttcaccaacgccgactacttcgccctcgtcggccccaccgggtcaggcaagtccacc
gttctcgatgccctcaccttcgccctgtacggctcggcctaccggtggggccgcagcaac
gccatcgcctacgcgctcgcccccacgagcaaccgctgcacggtctcgctcaccttcgac
gtcgcatcccagcgctaccaagtcgcccgcgaagtccgccgcgtcggccaacagatccag
caaaagaccgtcagcctggtgaagttcgccgaccccacggcggtcgtcaccgacgcagac
gggccacagccggaagtactggccggagaaatcaaggaactcaacgccgccatcgagcag
ttgctcggactgtccttcgacgacttctgccagtgcgtcgtcctgccccagggcgacttc
gcccgcttcctgtccgccaacgcccgcgaccggcagcagatcctgctcaagctgctcgga
gccgcccactacgaaggcatcggcaaacgcgccggcgcccaggcggctgaagcagccaag
gagatcgcggtcctcaccgaccagctgagccggcacgccgacgctaccccgcaagccgag
gccgacgcccaggcacgcctctcggcactgggacagctggccgccaccgtcgaccagctc
gtgccccgcgtcgccgaggcacactcccgcgccgacgacgcccacgcacgtgtcgccact
ctgcgcaccgaactcgcccggctcacccccctccgcaccccggacggcatcggagagctg
cagcgccgtgccgtggaggcccagacagccgcccacaaggcccgcgacgccgccgacgcg
gctgcccagaccctggccgacgccaccaaagctgcccaatccggcccgcagcgcgctgtc
ctcaacattgcccgcgaccgctacaccgagaaggccggcttggccgggcgccgcgacgca
gtcatcgcggctgcgcagcgtgcccgccaagagctggcgcagagcgaggagcggctacgg
gcgctggcagacgccgtcactaaggctcgccgcaccgccgaggagacccgcggccgccgc
gaccgggtacaacaggcgtacgcggcattgcagcgtcgccaacagatgctggctcccgtc
cgaacccccgacggtgccagtgatctgaccagccgggcagcggctctggcacggcaggcc
gacgccgccgccacccagctggccgcggcccgcgaccggcacaaccagtccgcttccgcg
ctcaccgccgccggcgacggcagccggctcaccgaggcgcgcgaggtactcgaccagctc
ctccacgtcaccagctccctcaccgacgccaccagcgagctggatgacgccgtggaggca
gtcgcccaggccgacagtgcggtcaccggcgcgcaggtgcgtctcgacgcggccacggcc
gccctcgaggaagcccgcaccctcgccggtgccgcccagctacgccctcagctccaggtg
ggccacgcctgcccggtctgcgagcagagcgtcaccatcctcccgccgccgctgtccgac
ccggccctggccgccgcccaggccgcgcgtgacgctgcggtccgcgaacaccgtgacctg
ctttcccagcgtcaggccgccaccaggacggttgccgccaagcagcgcgccgcggacacc
ctgacccagcggcgcaccctgctcgatgagcggctgggcacgctgttgcccgatcgtcct
gccgacaccgaacgcgactgcgacgccgaccgcgcccatcttgacgaacgcgctgcagcc
cgtgaccagttggtcgccgccgagcagcaggcacgtgccgcggtacaggaggccgaagcc
gcgcacacctccgccactgcggccgtcgccacgctgcaaagggagatcgatcgcacccgc
agcggactccacacgcaactgggcgccctggccgaactcgacccgcctgccgtcgacacc
catgacgtgaccgccgcctggtccgacctgcaagcgtgggcccaggcccagaggtccacg
gtggaagacgacctttcagccgcccaggccgaggccgccacctcgcatcaggcccaccag
gacgcgaccgccacgctggaagtagccgagcaagcacacgccaccgcccacagcgtccac
accatcgccgtccagcagagcgcagccgccgaccacgcgcagagcaccctgaccgaccgc
ctgagcgaactgcagacgctgctggaccaggcgccgcccgcagatgcactgccgggcctg
ttggaggaatgcgaccgcctcgaagcggccgtggagaccgccacagccgaggcaagtcag
acacgcgaggcactcaaggcggcggaggccgaacagcagcagtggcaggctcgcaccgcg
accgcctggtccgagctgactgctgcccgggacgcggtggcggcccttaaaccgccgagc
ctggacaccgacgacctcgccgccgcctgggccagcctggccgcctgggccatccgcgcg
gccgacgaccggcaggcggacaccctgcgcgcgcaagccgacgcccacaccgcacacagc
gaagccgaccaactcctgggccaactggagggtctgctgcgcgaccacgacctggatccc
caagacctcggcgacggctccgagcgcgccgcccaggccccccgggtggtagcggtcgca
gccgagcgggcccggggccgggtagagatgatccagcgcagcctcgccgacgccgccgcc
atacaggacaagatcgacagcgcccgcacccagcaacaggtggccgccgagctggccagg
ctgatgcggtccaacaagttcccgcagtggctggccgattcagccctcgacatcctggtc
gcgggtgcctcgcagtcgctgcgccggttgtcgggtgaccgattcgacctcagccaccac
aaaggcgagttctacgtcatcgaccactccgacgccgactcacaacgctcggttcgcacc
ctgtccggcggcgaaaccttccaggccagcctttcactggcgttggccctgtccgaccag
ctggccggcatgggcggcgcgacgaagctcgagtccatattcctcgacgaaggattcggc
acccttgatcccgactcgctcgagatggtcgccgacaccctggagaatctcgcccaaggg
gagcggatggtcggggtgatcacccacgtcaccgggctcgccgaacgggtgccggtccgc
tttcaagtacaccgcgacccccacacttccgtcgtcacccgggaaggcacatga
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