Streptomyces pristinaespiralis: SPRI_0038
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Entry
SPRI_0038 CDS
T04073
Name
(GenBank) nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
spri
Streptomyces pristinaespiralis
Brite
KEGG Orthology (KO) [BR:
spri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spri03400
]
SPRI_0038
DNA repair and recombination proteins [BR:
spri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SPRI_0038
Archaeal homologous recombinant proteins
SPRI_0038
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Asp_Glu_race
Motif
Other DBs
NCBI-ProteinID:
ALC18344
UniProt:
A0A0M4DH75
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Position
complement(54703..55872)
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AA seq
389 aa
AA seq
DB search
MKFLHTSDWHVGKTLKGRNRLEEQAGVLREITQIAVGNDVDAVLIAGDLYENAAPTADAQ
RLVVRTLLQLAKQDIEVVLIAGNHDHGATLEAYKPLMDIAGIHVYGQARPAAKGGVHSFR
AKSTDERVNVAVLPFLSQRYAVRAAEIIANTPSQNVGAYDQLIRDVLDNLTGAFTSDAVN
IVMAHLTCTGGVFGGGERAAQSIMEYHVPAAIFPVEAHYVALGHLHRRQTIPAACPVHYS
GSPYAIDFGEQNNTHVVCLVEASPGTPAKITDIPVTAGRRLRTIEGTVAQLTADPAVYGE
DYLRLVITQPAYASMRDDLLEALPNALEIRIHPDHASTGATAGIATHQPTKTPAQLFSDY
CHSVGVSDDRVTALFNHLHDDLTRSTARS
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
gtgaagtttctgcatacctccgactggcatgtcggcaagaccctcaagggccgtaaccgg
ctcgaggagcaggcaggcgtactgcgtgagatcacccagatagccgtcggcaacgacgtc
gatgctgtcctcatcgctggcgatctctacgagaacgccgcgcccaccgcggacgcccaa
aggcttgtcgtgcgcaccctgctgcaactggccaagcaggacatcgaggtcgtcctgatc
gccggcaaccacgaccacggtgccacactcgaggcctacaagccgctgatggacatcgcc
ggcatccacgtctatggccaggcccgcccggccgcaaagggcggcgtgcacagcttccgc
gccaagtccaccgacgagcgcgtcaacgtcgccgttctgccgtttctctcccagcgctac
gccgtccgcgccgcggagatcatcgccaacaccccgtcccagaacgtcggcgcctacgac
cagctcatccgagatgtcctggacaacctgacaggggctttcacctccgacgccgtcaac
atcgtcatggcccacctgacgtgcaccggcggcgtcttcggcggcggcgagcgggcagcc
caatcgatcatggaataccacgtgcccgccgctatcttccccgtcgaagcgcactacgtg
gccctgggccacctgcaccgccgacagacgatcccggccgcctgcccggtgcactacagc
ggatccccctatgcgatcgacttcggcgagcagaacaacacccacgtggtctgcctcgtc
gaagcctctcccggcacccccgcgaagatcaccgacatcccggtcactgccggccgcagg
ctgcgcaccatcgaggggaccgtcgcccagctcaccgccgaccccgccgtctacggcgag
gactacctccggctcgtgatcacccagcccgcctacgccagcatgcgcgacgacctgctg
gaagccctccccaacgccctcgaaatccgcatccaccccgaccacgcgagcaccggcgcc
acggcgggcatcgccacccaccagccgaccaagacgcctgcgcaactgttctccgactac
tgccacagcgtcggcgtcagcgacgaccgggtcacggccctgttcaaccacctgcacgac
gacctgacccgctcgaccgcccgctcctga
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