KEGG   Streptomyces pristinaespiralis: SPRI_0776
Entry
SPRI_0776         CDS       T04073                                 
Name
(GenBank) DNA lyase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
spri  Streptomyces pristinaespiralis
Pathway
spri03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:spri00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SPRI_0776
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spri03400]
    SPRI_0776
Enzymes [BR:spri01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     SPRI_0776
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     SPRI_0776
DNA repair and recombination proteins [BR:spri03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     SPRI_0776
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco zf-FPG_IleRS Zn_ribbon_TFIIB NFACT_N Ribosomal_S13 Zn_ribbon_8
Other DBs
NCBI-ProteinID: ALC19082
UniProt: A0A0M4DMZ9
LinkDB
Position
complement(925258..926118)
AA seq 286 aa
MPELPEVEALREFLDAQLVGRRIERVLPVAISVLKTYDPPLSALEGTDVTGVRRHGKWLD
VTAGGLHLVVHLARAGWLQWKDELPAQPPRPGKGPLAMRTALVGGGGFDLTEAGTTKRLA
VHVVRDPADVPGVARLGPDPLADDFDRAAFARVLEGERRQIKGALRDQSLIAGIGNAYSD
EILHAARMSPFKPVQNLGDEETDTLYEALRTTLADAVERSRGLAAGRLKSEKKSGMRVHG
RTGRPCPVCGDTVREVAFSDSSLQYCPTCQTGGRPLADRRLSRLLK
NT seq 861 nt   +upstreamnt  +downstreamnt
atgcccgaactgccggaggtcgaagcgctacgggagttcctcgacgcccaactcgtgggc
cggaggatcgaacgagtgctgcccgtggccatcagcgtgctcaagacctacgacccgccg
ctctccgccctcgaaggaacggacgtcaccggcgttcgacggcacggcaagtggctcgac
gtcaccgcgggcgggctccacctcgtcgtccatctcgcccgcgcgggctggctccaatgg
aaggacgagctccccgcgcagccgccccgccccggcaaaggaccgctggcgatgcggacg
gcactggtcggaggcggcggcttcgacctgacggaggccgggaccaccaagcggctcgcc
gtgcacgtcgtccgcgacccggccgacgtgcccggcgtggcacggctcggacccgacccg
ctggccgacgacttcgaccgcgccgccttcgcgagggtgctggagggcgagcggcgccag
atcaagggcgcactgcgtgaccagagcctgatcgcgggcatcggcaacgcgtacagcgac
gagatcctgcacgccgccaggatgtcgcccttcaaacccgtgcagaacctcggcgacgaa
gagaccgacaccctgtacgaggcgctgcggaccaccctcgccgacgccgtggagcgctct
cggggtctggcggcgggccggctcaagtcggagaagaagagcggcatgcgggtccacggc
cgcaccggccggccgtgtcccgtgtgcggcgacaccgtccgtgaagtggccttcagcgac
tcgtcgttgcagtactgccccacctgccagaccggtggccgcccactcgcggaccgccgg
ctctcccgcctgctcaagtga

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