Streptomyces pristinaespiralis: SPRI_0776
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Entry
SPRI_0776 CDS
T04073
Name
(GenBank) DNA lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
spri
Streptomyces pristinaespiralis
Pathway
spri03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SPRI_0776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spri03400
]
SPRI_0776
Enzymes [BR:
spri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SPRI_0776
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SPRI_0776
DNA repair and recombination proteins [BR:
spri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SPRI_0776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
Ribosomal_S13
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
ALC19082
UniProt:
A0A0M4DMZ9
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All DBs
Position
complement(925258..926118)
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AA seq
286 aa
AA seq
DB search
MPELPEVEALREFLDAQLVGRRIERVLPVAISVLKTYDPPLSALEGTDVTGVRRHGKWLD
VTAGGLHLVVHLARAGWLQWKDELPAQPPRPGKGPLAMRTALVGGGGFDLTEAGTTKRLA
VHVVRDPADVPGVARLGPDPLADDFDRAAFARVLEGERRQIKGALRDQSLIAGIGNAYSD
EILHAARMSPFKPVQNLGDEETDTLYEALRTTLADAVERSRGLAAGRLKSEKKSGMRVHG
RTGRPCPVCGDTVREVAFSDSSLQYCPTCQTGGRPLADRRLSRLLK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgccggaggtcgaagcgctacgggagttcctcgacgcccaactcgtgggc
cggaggatcgaacgagtgctgcccgtggccatcagcgtgctcaagacctacgacccgccg
ctctccgccctcgaaggaacggacgtcaccggcgttcgacggcacggcaagtggctcgac
gtcaccgcgggcgggctccacctcgtcgtccatctcgcccgcgcgggctggctccaatgg
aaggacgagctccccgcgcagccgccccgccccggcaaaggaccgctggcgatgcggacg
gcactggtcggaggcggcggcttcgacctgacggaggccgggaccaccaagcggctcgcc
gtgcacgtcgtccgcgacccggccgacgtgcccggcgtggcacggctcggacccgacccg
ctggccgacgacttcgaccgcgccgccttcgcgagggtgctggagggcgagcggcgccag
atcaagggcgcactgcgtgaccagagcctgatcgcgggcatcggcaacgcgtacagcgac
gagatcctgcacgccgccaggatgtcgcccttcaaacccgtgcagaacctcggcgacgaa
gagaccgacaccctgtacgaggcgctgcggaccaccctcgccgacgccgtggagcgctct
cggggtctggcggcgggccggctcaagtcggagaagaagagcggcatgcgggtccacggc
cgcaccggccggccgtgtcccgtgtgcggcgacaccgtccgtgaagtggccttcagcgac
tcgtcgttgcagtactgccccacctgccagaccggtggccgcccactcgcggaccgccgg
ctctcccgcctgctcaagtga
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