Streptomyces pristinaespiralis: SPRI_0812
Help
Entry
SPRI_0812 CDS
T04073
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
spri
Streptomyces pristinaespiralis
Pathway
spri00040
Pentose and glucuronate interconversions
spri01100
Metabolic pathways
spri02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
spri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
SPRI_0812
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SPRI_0812
Enzymes [BR:
spri01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
SPRI_0812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
PBP_N
F5_F8_type_C
Motif
Other DBs
NCBI-ProteinID:
ALC19118
UniProt:
A0A0M5J0A0
LinkDB
All DBs
Position
complement(967661..969217)
Genome browser
AA seq
518 aa
AA seq
DB search
MKHPVALRLSAALATGALAAAAGVALSTPEASAATGGATGFATQNGGTTGGAGGQTVRAT
TGTAIHTALCNRASSSTPITIQVEGTINHGNTSKVSGASCNTADGVIELKQISNVTIVGV
GGGAVFDQVGIHIREARNIIIQNVTVKNVKKSGSPTSNGGDAIGMESGVRNVWVDHTTLE
ASGGESEGYDGLFDMKDNTQYVTLSYSILRNSGRGGLVGSSESDVSNGYVTYHHNLYENI
DSRAPLLRGGIGHMYNNHYKSLNESGINSRAGARAKVDNNYFEDSKDVLGTFYTDAAGYW
QVGGNIFDNVTWSSPGSDNNPAGPDPKSNTTVSIPYSYSLDGASCVPGVVSQTAGANKGL
RVSDGNCTPQTPDPTTPAPTPTTPAPDPTTPAPTQPSGTNLSLGAGSDGTSKADGTSYGN
VRDGDMNTYWSPAGSTGSVSVKWGSATTVSQINIREASGSVGSIGSWRVVNHDTGAVLTS
GSGAGLITIPRTTLQKITFEITGSTGTPRVAEFETYAG
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatccagtcgcactacgactctccgccgcgctggccacaggcgccctcgcggcc
gcggccggtgtggctctgtcgacgccggaggcgtcggcggcgaccggcggcgccaccggc
tttgccacccagaacggcgggaccaccggtggtgcgggcggccagacggtacgggccacc
acggggaccgcgatccacacggccctgtgcaaccgggccagcagcagcaccccgatcacc
atccaggtcgaggggaccatcaaccacggcaacaccagcaaggtgtcgggcgccagttgc
aacaccgccgacggcgtgatcgagctcaagcagatcagcaacgtcacgatcgtcggcgtc
ggcggcggagccgtcttcgaccaggtgggcatccacatccgtgaggcccgcaacatcatc
atccagaacgtgaccgtcaagaacgtcaagaagtcgggctcgcccacctccaacggcggc
gacgccatcggcatggagagcggcgtgcgcaacgtctgggtcgaccacaccacgctggag
gcgtcgggcggtgagtcggagggctacgacggcctcttcgacatgaaggacaacacccag
tacgtgaccttgtcctacagcatcctgcgcaactccggccgcggcggtctcgtcggctcc
agcgagagcgacgtgtccaacggctacgtcacctaccaccacaacctgtacgagaacatc
gactcccgtgcgcccctgctgcgtggcggcatcggccacatgtacaacaaccactacaag
agcctcaacgagtccggcatcaactcccgcgccggggcccgcgccaaggtcgacaacaac
tacttcgaggactccaaggacgtcctcggcaccttctacaccgacgcggccggctactgg
caggtcggcggcaacatcttcgacaacgtgacctggtcgagcccgggcagcgacaacaac
cccgcaggaccggacccgaagtccaacaccacggtcagcatcccgtactcctacagcctc
gacggcgccagttgtgtgccgggagtcgtgagccagacggcgggcgccaacaagggactg
cgggtgtcggacggcaactgcacgccgcagacgccggacccgaccacccccgcccccacc
ccgacgacccccgcgccggacccgaccacgcccgcgccgacccagcccagcggtaccaac
ctcagcctcggggccggctccgacggcaccagcaaggccgacggcacgagctacggcaac
gtgcgcgacggtgacatgaacacctactggtcgccggccggctcgaccggttccgtctcg
gtcaagtggggctccgccaccacggtgtcgcagatcaacatccgggaggcctccggctcc
gtgggcagcatcggatcctggcgggtcgtcaaccacgacaccggcgccgtgctgacctcc
ggaagcggtgcgggcctcatcaccatcccccggaccactcttcagaagatcaccttcgag
atcaccggctcgacgggcacgccccgggtcgccgagttcgagacctacgccggatag
DBGET
integrated database retrieval system