Streptomyces pristinaespiralis: SPRI_0875
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Entry
SPRI_0875 CDS
T04073
Name
(GenBank) secreted pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
spri
Streptomyces pristinaespiralis
Pathway
spri00040
Pentose and glucuronate interconversions
spri01100
Metabolic pathways
spri02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
spri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
SPRI_0875
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SPRI_0875
Enzymes [BR:
spri01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
SPRI_0875
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GFIT
Motif
Pfam:
Pectate_lyase_4
Fil_haemagg_2
Motif
Other DBs
NCBI-ProteinID:
ALC19181
UniProt:
A0A0M5J0A9
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All DBs
Position
1037861..1039168
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AA seq
435 aa
AA seq
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MHRTTHTLRCQGRIIATALGCTALVLTATAAANATPHRDLARQTLPARDGWASLGTGTTG
GAAARPAQVHTVTTWEEFRAALAGDGDAPRIIKVKGTLDATAAGCAAFEAAGYDFDTYLA
DYDPAVWGYDTPVSGAQEDLRAASADNQAQAIKAYVPANTTIVGVGRDAGIVGASLQIKG
VDNVIVRNLTLESPLDCFPQWDPTDGATGAWNSEYDSLVVYGATHVWIDHNTFTDGRHPD
SSLPSYYGELYQQHDGELDIVRGADLVTASWNVFADHDKTLMIGNSDSAGDTDRGKLRVT
LHHNLFRAVVERAPRVRFGQVDTYNNHYIVDKDAYAYSFGIGAESRLVAEANSFTLPAGV
GAGRILKKWKDAPVTAERNHVNGREVDLVAVHNAEVPEETLRSGAGWTPTLRTRVDHPRA
VPLLVGHRAGAGRLR
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgcaccacgcacacactgagatgtcagggacgcatcatcgcgacggccctggga
tgcaccgcactggtcctgaccgccaccgcggcggcgaacgccactccccaccgggacctc
gcccgccagacgctgcccgcccgcgacggctgggcctcgctcggcaccggcaccaccggc
ggggccgcggcccgccccgcacaggtgcacaccgtcaccacctgggaggagttccgggcc
gcgctcgccggcgacggcgacgcgccccggatcatcaaggtgaagggcaccctcgacgcc
accgcggccggctgcgccgcgttcgaggcggcgggctacgacttcgacacctatctcgcc
gactacgaccccgcggtatggggctacgacaccccggtcagcggcgcccaggaggacctg
cgcgccgcgtcggcggacaaccaggcacaggcgatcaaggcgtacgtgcccgcgaacacc
accatcgtcggcgtcggccgggacgcgggcatcgtcggcgccagtctccagatcaagggc
gtcgacaacgtcatcgtccgcaacctcacgctggagagcccgctggactgcttcccccag
tgggacccgacggacggcgcgaccggcgcgtggaactccgagtacgacagtctcgtggtg
tacggggccacccatgtgtggatcgaccacaacacgttcaccgacgggcgccaccccgac
agttcgctgccgtcctactacggcgagctgtaccagcagcacgacggcgagctcgacatc
gtcaggggcgccgacctggtgacggcgtcctggaacgtgttcgccgaccacgacaagacc
ttgatgatcggcaacagcgacagcgccggcgacacggaccgcggcaagctgcgggtcacg
ctgcaccacaacctgttccgggccgtcgtcgagcgcgcgccccgggtccgcttcggccag
gtcgacacgtacaacaaccactacatcgtcgacaaggacgcctacgcctacagcttcggc
atcggcgcggagtcccggctcgtcgccgaggcgaactcgttcacgctcccggcgggtgtg
ggcgcgggccggatcctcaagaagtggaaggacgctcccgtcaccgccgagcggaaccac
gtcaacggccgggaggtcgacctggtggccgtccacaacgcggaggtgccggaggagacc
ctgcggtcgggcgccggctggacgcccacgctgcgcacccgggtcgaccacccgcgggcc
gtccccctgctggtcggccaccgggcgggcgcgggccggctgcgctga
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