Streptomyces pristinaespiralis: SPRI_1789
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Entry
SPRI_1789 CDS
T04073
Name
(GenBank) putative Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
spri
Streptomyces pristinaespiralis
Brite
KEGG Orthology (KO) [BR:
spri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spri03016
]
SPRI_1789
Enzymes [BR:
spri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
SPRI_1789
Transfer RNA biogenesis [BR:
spri03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SPRI_1789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
ALC20095
UniProt:
A0A0M4DPT9
LinkDB
All DBs
Position
2072969..2074255
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AA seq
428 aa
AA seq
DB search
MTDAQETAAETTLHTTGGAPSDDEVPAAGLPIPLLEPREGIPPVVADEDALAEVIAAFAA
GTGPVAVDAERASGYRYGQRAYLVQLRREGAGTALVDPVGCPDLSALGDALADTEWILHA
ATQDLPCLREIGMVPARIFDTELAGRLGGFPRVGLGAMVESVLGYALEKGHSAVDWSTRP
LPEPWLRYAALDVELLVDLRDALEKELDRQGKLDWAHQEFDAIASAPPPPPRRDPWRRTS
GMHKVRRRRQMAVVREMWTVRDRVAQRRDVSPGKVLGDAAIVEAALALPANVHALTALPG
FGHRMGRRQLEQWQAAVDRAKALPDSELPQPGQPLNGPPPPRSWADKDPAAAARLSAARA
AVSALAEQLNMPQENLITPDTVRRVCWEPPATVTLTSVADVLESLGARPWQRELVAPLLA
AALTARPA
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgcccaagagaccgcagcagagacgacactgcataccaccgggggcgctccc
tcggacgacgaggtccctgccgcagggctgccgatcccgttgctggagccccgtgagggc
attcccccggtggtcgccgacgaggacgccctggccgaggtgatcgccgcgttcgcggcc
ggcaccggccccgtggccgtcgacgcggagcgcgcgtccggctaccgctacggacagcgc
gcgtacctcgtgcagctgcgccgcgagggcgccggcaccgcgctcgtcgatcccgtcggc
tgtcccgacctttccgcgctcggcgacgcgctcgccgacaccgagtggatcctgcacgcc
gccacgcaggaccttccctgcctgcgtgaaataggcatggtcccggcgcggatcttcgac
acggagctggccgggcggctcggcggcttcccccgggtcggcctcggcgcgatggtcgag
agcgtgctcggctacgccctggagaagggccactccgccgtcgactggtccacccgcccg
ctgcccgagccgtggctgcgctacgcggcgctcgacgtggagctgctggtcgacctgcgc
gacgcgctggagaaggaactggaccggcagggcaagctcgactgggcccaccaggagttc
gacgcgatcgcctccgccccgcccccgccgccgcgccgtgacccctggcggcgtacgtcg
gggatgcacaaggtgcgccgccgccgccagatggcggtcgtacgggagatgtggaccgtg
cgcgaccgggtcgcccagcgccgggacgtgtcccccggcaaggtgctcggcgacgccgcg
atcgttgaggccgcgctcgccctgccggcgaacgtgcacgccctcaccgcgctgcccggc
ttcgggcaccggatgggccggcgtcagctcgagcagtggcaggccgcggtcgaccgggcc
aaggccctgcccgactccgaactcccgcagcccggccagccgctgaacggtccgccgccg
ccccggtcgtgggccgacaaggacccggccgccgcggcccgcctgtccgccgcgcgcgcg
gcggtctccgcgctggcggagcagctgaacatgccgcaggagaacctgatcacgccggac
accgtgcggcgggtgtgctgggagccgcccgcgacggtcacgctcacgtcggtggccgac
gtgctggagtccctcggcgcgcgtccgtggcagcgggagctcgtcgcgcccctgctggcc
gcggcgctcacggcccgcccggcgtag
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