Streptomyces pristinaespiralis: SPRI_2165
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Entry
SPRI_2165 CDS
T04073
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
spri
Streptomyces pristinaespiralis
Pathway
spri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPRI_2165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spri03019
]
SPRI_2165
03016 Transfer RNA biogenesis [BR:
spri03016
]
SPRI_2165
Enzymes [BR:
spri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SPRI_2165
Messenger RNA biogenesis [BR:
spri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SPRI_2165
Transfer RNA biogenesis [BR:
spri03016
]
Prokaryotic type
tRNA degradation factors
SPRI_2165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
KH_PNO1_2nd
KH_KhpA-B
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
ALC20471
UniProt:
A0A0M4D8G5
LinkDB
All DBs
Position
complement(2552532..2554748)
Genome browser
AA seq
738 aa
AA seq
DB search
MENETHYAEAVIDNGAFGTRTIRFETGRLAKQAAGSAVAYLDDDTMVLSATTASKKPKDQ
LDFFPLTVDVEERMYAAGKIPGSFFRREGRPSEDAILTCRLIDRPLRPSFKKGLRNEIQI
VETIMALNPDHLYDVVAINAASCSTQLAGLPFSGPIGGTRVALIKGQWVAFPTHTELEDA
VFDMVVAGRVLEDGDVAIMMVEAEATEKTIELVKGGAEAPTEEVVAAGLEAAKPFIKVLC
KAQSDLAAKAAKPTGEFPVFLDYQDDVLEALTAAVKSELAQALTIAGKQERETELDRIKE
LAAEKLLPAFEGREKEISGAYRALTKKLVRERIIKDKVRIDGRGITDIRTLAAEVEAIPR
VHGSALFERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSVGETGRVGSP
KRREIGHGALAERAIVPVLPTREEFPYAIRQVSEALGSNGSTSMGSVCASTMSLLNAGVP
LKAPVAGIAMGLISEQIDGETHYVALTDILGAEDAFGDMDFKVAGTKTFVTALQLDTKLD
GIPASVLAAALKQARDARLHILDVMNEAIDVPDEMSPNAPRIITVKIPVDKIGEVIGPKG
KMINQIQEDTGADITIEDDGTIYIGAADGPAAEAARATINGIANPTMPEVGERYLGTVVK
TTTFGAFVSLLPGKDGLLHISQIRKLAGGKRVENVEDVLAVGSKVQVEIAEIDSRGKLSL
IPVVEGEEGDETKDDTDK
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
gtggagaacgagacccactacgccgaggccgtcatcgacaacggcgccttcggcacccgc
accatccgcttcgagacgggccgcctggccaagcaggccgccggctccgccgtggcgtac
ctggacgacgacaccatggtgctgtcggccaccaccgcttcgaagaagcccaaggaccag
ctcgacttcttccccctcacggtggacgtcgaggagcggatgtacgcagccggcaagatc
cccggctccttcttccgccgtgagggccggccctccgaggacgcgatcctcacctgccgc
ctgatcgaccgcccgctgcgcccctccttcaagaagggcctgcgcaacgagatccagatc
gtcgagacgatcatggctctcaaccccgaccacctgtacgacgtggtcgccatcaacgcc
gcctcctgctccacgcagctggccggcctgcccttctccggcccgatcggcggcacccgt
gtcgcgctgatcaagggccagtgggtcgcgttcccgacgcacaccgagctcgaggacgcc
gtcttcgacatggtggtcgccggccgcgtcctcgaggacggcgacgtcgcgatcatgatg
gtcgaggccgaggccaccgagaagacgatcgagctcgtcaagggcggcgccgaggcgccg
accgaggaggtcgtcgccgccggtctcgaggccgcgaagcccttcatcaaggtcctctgc
aaggcgcagtcggacctcgccgccaaggccgccaagcccaccggcgagttcccggtcttc
ctcgactaccaggacgacgtcctggaggcgctgaccgccgccgtcaagagcgagctcgcc
caggcgctgaccatcgccggcaagcaggagcgcgagaccgagctcgaccgcatcaaggag
ctcgccgccgagaagctcctcccggccttcgaaggccgcgagaaggagatctcgggcgcc
taccgcgcgctgaccaagaagctggtccgcgagcggatcatcaaggacaaggtccgcatc
gacggccgtggcatcacggacatccgtacgctcgcggccgaggtcgaggccatcccgcgg
gtgcacggttccgcgctgttcgagcgtggcgagacccagatcctgggcgtcaccaccctg
aacatgctccgcatggagcagcagctggacaccctctccccggtgacccgcaagcgctac
atgcacaactacaacttcccgccgtactccgtcggtgagaccggccgcgtgggctcgccc
aagcgccgcgagatcggccacggagcgctcgcggagcgcgccatcgtgccggtgctgccg
acgcgcgaggagttcccctacgcgatccgccaggtctccgaggcgctgggctccaacggc
tcgacgtccatgggctcggtctgcgcctccaccatgtcgctgctgaacgccggtgtgccg
ctcaaggcccccgtcgccggtatcgccatgggtctgatctccgagcagatcgacggcgag
acgcactacgtcgccctcaccgacatcctcggtgcggaggacgccttcggcgacatggac
ttcaaggtcgccggcaccaagaccttcgtcaccgcgctgcagctcgacaccaagctcgac
ggcatccccgcctcggtcctggccgccgcgctgaagcaggcccgtgacgcgcgtctgcac
atcctcgacgtgatgaacgaggcgatcgacgttccggacgagatgtccccgaacgcgccg
cgcatcatcaccgtcaagatcccggtggacaagatcggtgaggtcatcggccccaagggc
aagatgatcaaccagatccaggaggacaccggcgccgacatcacgatcgaggacgacggc
accatctacatcggtgccgccgacggtccggccgcagaggccgcccgcgccacgatcaac
ggcatcgccaacccgaccatgccggaggtcggcgagcgttacctgggcaccgtcgtgaag
acgacgaccttcggtgcgttcgtgtccctgctcccgggcaaggacggcctgctgcacatc
tcgcagatccgcaagctcgccggcggcaagcgcgtggagaacgtcgaggacgtgctcgcc
gtgggctccaaggtccaggtcgagatcgccgagatcgactcgcgcggcaagctctccctc
atccccgtggtcgagggcgaagagggcgacgagacgaaggacgacaccgacaagtga
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integrated database retrieval system
