Streptomyces pristinaespiralis: SPRI_4487
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Entry
SPRI_4487 CDS
T04073
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
spri
Streptomyces pristinaespiralis
Brite
KEGG Orthology (KO) [BR:
spri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spri03021
]
SPRI_4487
Transcription machinery [BR:
spri03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SPRI_4487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_3
Sigma70_ECF
DUF7343
MarR_2
HTH_24
HTH_10
MarR
Apolipoprotein
GerE
DUF1492
Motif
Other DBs
NCBI-ProteinID:
ALC22793
UniProt:
A0A0M3QJB7
LinkDB
All DBs
Position
complement(5208734..5209627)
Genome browser
AA seq
297 aa
AA seq
DB search
MSPRLDASRTPTAPSTLSTPTDEQVAGPEALEGLPEIPPFEQVGAVDARELSKTLFARLA
SLEEGTHEYAYVRNTLVELNLALVKFAASRFRTRSEPMEDIIQVGTIGLIKAIDRFELSR
GVEFPTFAMPTIIGEIKRFFRDTSWSVRVPRRLQELRLDLAKAGDELSQQLDRAPTVDEL
AQRLDIGRDEVVEGMAASNAYTASSLDAQPEEDDSEGALANRIGYEDHGLEGIEYIESLR
PMIASLPPRDRKILSLRFVANMTQSEIGEELGISQMHVSRLLSRTLRRLRKGLTLEE
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccccggctcgacgcatcgcgaacccccaccgcgccgtcgacactgtccaccccc
accgacgaacaggtcgcgggccccgaagccctcgagggtcttccggagatcccgccgttc
gaacaagtgggagcggtggacgcgcgagaactgtccaagacgctcttcgcacgcctcgcg
tccctcgaggagggcacgcacgagtacgcgtacgtccgcaacaccctggtggaactgaac
ctcgcgctggtcaagttcgccgcctcacggttccgcacccgcagcgaaccgatggaggac
atcatccaggtcggcacgatcggcctgatcaaggcgatcgaccgcttcgaactcagccgc
ggcgtcgagttccccaccttcgcgatgccgaccatcatcggcgagatcaagcgcttcttc
cgcgacaccagttggtcggtgcgggtgccgcgccggctccaggaactgcgtctcgacctc
gcgaaggccggtgacgagctctcccagcagctcgaccgcgcccccaccgtcgacgagctc
gcgcagcggctcgacatcggccgggacgaggtcgtggaaggcatggccgcgagcaacgcg
tacaccgcgagctcgctggacgcccagcccgaggaggacgacagcgagggcgccctcgcc
aaccgcatcggctacgaggaccacggactcgagggcatcgagtacatcgagtcgctcagg
ccgatgatcgcgagccttcccccgcgggaccgcaagatcctctccctccgcttcgtcgcc
aacatgacgcagtcggagatcggtgaagaactcggcatctcgcagatgcacgtgtccagg
ctgctgtcgcggacgctccgcaggctccgcaagggcctgacgctggaggagtga
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