Streptomyces pristinaespiralis: SPRI_5441
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Entry
SPRI_5441 CDS
T04073
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
spri
Streptomyces pristinaespiralis
Pathway
spri03030
DNA replication
spri03430
Mismatch repair
spri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPRI_5441
03430 Mismatch repair
SPRI_5441
03440 Homologous recombination
SPRI_5441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spri03032
]
SPRI_5441
03400 DNA repair and recombination proteins [BR:
spri03400
]
SPRI_5441
Enzymes [BR:
spri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SPRI_5441
DNA replication proteins [BR:
spri03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SPRI_5441
DNA repair and recombination proteins [BR:
spri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SPRI_5441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HHH_3
MCM10_OB
Motif
Other DBs
NCBI-ProteinID:
ALC23747
UniProt:
A0A0M4DJK4
LinkDB
All DBs
Position
6338486..6342025
Genome browser
AA seq
1179 aa
AA seq
DB search
MTKPPFTHLHVHTQYSLLDGAARLKDMFEACNEMGMTHIAMSDHGNLHGAYDFFHTAKKA
GVTPIIGIEAYVAPESRRNKRKIQWGQPHQKRDDVSGSGGYTHKTIWAANATGLHNLFRL
SSDAYAEGWLQKWPRMDKETISQWSQGLIASTGCPSGELQTRLRLGQFDEALKSASEYQD
IFGKDRYFLELMDHGIEIERRVRDGLLEIGKKLGIPPLVTNDSHYTYAHEAAAHDALLCI
QTGKNLSDPDRFRFDGTGYYLKSTDEMYAIDSSDAWQEGCRNTLLVAQQVDTEGMFEAKN
LMPKFDIPEGHTEVTWFKEEVMRGMERRFPGGIPEDRQKQVEYEMDVIIQMGFPGYFLVV
ADFIMWAKNQGIAVGPGRGSAAGSIVAYAMGITDLDPIPHGLIFERFLNPERVSMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRLTKAMP
ADVLGKGIDLNGITDPSHPRYSEAGEIRAMYENEPDVKKVIDTAKGVEGLVRQMGVHAAG
VIMSSETITEHVPVWVRHTDGVTITQWDYPQCESLGLLKMDFLGLRNLTIMDDAIKMVKS
NKGIDLEMLSLPLDDPKTFELLQRGDTLGVFQFDGGPMRSLLRLMKPDNFEDISAVSALY
RPGPMGMNSHTNYALRKNKQQEITPIHPELEEPLREVLDVTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPDELAKNFVLFQKGAREKGYSDEAIQALWDVLVPFAGYAFNKA
HSAAYGLVSYWTAYLKANHPAEYMAALLTSVKDDKDKSAVYLNECRRMGIKVLPPNVNES
MSNFAAQGDDVILFGLTAVRNVGQNVVESIIKTRKAKGKYSSFPDFLDKVEAVVCNKRTI
ESLIKAGAFDEMGHTRKGLVAHHEPMIDNVVAVKRKEAEGQFDLFGGMGEEASDEPGFGL
DVEFSDVEWDKSYLLAQEREMLGLYVSDHPLFGIEHVLSDKTDAAISQLTGGEHADGAVV
TIGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDTVVFVKGRL
DKREDIPRLVAMELMVPDLSSAGTNAPVVVTIPTVKVTPPMVSRLGEILSHHKGNTEVRI
KLQGPRKTTVLRLDRHRVQPDPALFGDLKVLLGPSCLAG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaagccgcccttcacgcaccttcacgtccacacccagtactcgctgctggacggt
gctgcgcggctcaaggacatgttcgaggcgtgcaacgagatgggcatgacccatatcgcc
atgtccgaccacggcaacctccacggggcgtacgacttcttccacaccgcgaagaaggcc
ggggtcacgccgatcatcggcatcgaggcgtacgtcgcccccgagtcccggcggaacaag
cgcaagatccagtggggccagccgcaccagaagcgcgacgacgtctccggttccggtggt
tacacccacaagaccatctgggcggcgaacgccaccggcctgcacaacctgttccggctc
tcctccgacgcgtacgcggagggctggctgcagaagtggccgcggatggacaaggagacc
atctcgcagtggtcgcagggcctgatcgcctccaccggctgcccctccggagagctgcag
acccggctgcgcctcggccagttcgacgaggccctgaagtccgcgtccgagtaccaggac
atcttcggcaaggaccggtacttcctggagctgatggaccacggcatcgagatcgagcgg
cgcgtccgcgacggactgctggagatcggcaagaagctcggcatcccgcccctggtcacc
aacgactcccactacacgtacgcgcacgaggccgccgcccacgacgcgctgctgtgcatc
cagaccggcaagaacctctccgaccccgaccgcttccggttcgacggcaccggctactac
ctgaagtcgaccgacgagatgtacgcgatcgactcctccgacgcctggcaggaggggtgc
cgcaacaccctgctggtcgcgcagcaggtcgacaccgagggcatgttcgaggccaagaac
ctcatgcccaagttcgacatccccgagggccacaccgaagtcacgtggttcaaggaggag
gtcatgcgcggcatggagcgccgcttccccggcggcatcccggaggaccgccagaagcag
gtcgagtacgagatggacgtcatcatccagatggggttcccggggtacttcctcgtcgtc
gccgacttcatcatgtgggccaagaaccagggcatcgcggtgggccccggccgtggttcc
gcggccggctcgatcgtcgcgtacgccatgggcatcaccgacctcgacccgatcccgcac
ggcctgatcttcgagcgcttcctcaaccccgagcgcgtctccatgcccgacgtcgacatc
gacttcgacgagcgcaggcgcgtcgaggtgatcaggtacgtcacggagaagtacggcgcc
gacaaggtcgccatgatcggcacctacggcaagatcaaggcgaagaacgccatcaaggac
tccgcccgcgtgctgggctacccgtacgcgatgggcgaccggctgaccaaggccatgccc
gccgacgtcctcggcaagggcatcgacctcaacggcatcacggacccctcgcacccgcgg
tacagcgaggccggcgagatccgcgcgatgtacgagaacgagccggacgtgaagaaggtc
atcgacaccgccaagggcgtcgagggcctggtccggcagatgggcgtgcacgccgccggc
gtgatcatgtcgagcgagaccatcaccgaacacgtccctgtgtgggtcaggcacaccgac
ggcgtgaccatcacccagtgggactacccgcagtgcgagtcgctcggcctgctgaagatg
gacttcctgggcctgcgcaacctcacgatcatggacgacgccatcaagatggtgaagtcc
aacaagggcatcgacctggagatgctctccctgccgctcgacgaccccaagaccttcgag
ctgctgcagcgcggtgacaccctcggcgtcttccagttcgacggcgggcccatgcggtcc
ctgctgcggctgatgaagcccgacaacttcgaagacatctccgccgtgtccgcgctctac
cgcccgggcccgatgggcatgaactcgcacacgaactacgccctgcgcaagaacaagcag
caggagatcacaccgatccacccggagctggaggaaccgctccgggaggtcctggacgtc
acctacggcctgatcgtctaccaggagcaggtgcagaaggccgcccagatcatcgccggg
tactcgctcggcgaggcggacatcctccgccgcgtgatgggcaagaagaagcccgacgag
ctggcgaagaacttcgtcctcttccagaagggcgcccgcgagaagggctacagcgacgag
gccatccaggcactgtgggacgtgctggtccccttcgccggatacgccttcaacaaggcg
cactccgccgcgtacggcctggtctcctactggacggcgtacctcaaggccaaccacccc
gccgaatacatggcggcgctgctcacctcggtcaaggacgacaaggacaagtcggccgtc
tatctgaacgagtgccgccgcatgggcatcaaggtgctgccgcccaacgtcaacgagtcc
atgtcgaacttcgccgcgcagggcgacgacgtgatcctcttcggcctcaccgccgtgcgc
aacgtcggccagaacgtcgtcgagtcgatcatcaagacccgtaaggccaaggggaagtac
agctccttcccggacttcctcgacaaggtcgaggccgtcgtctgcaacaagcgcaccatc
gagtccctgatcaaggccggcgccttcgacgagatgggccacacccgcaagggcctggtc
gcccaccacgagccgatgatcgacaacgtggtcgcggtcaagcgcaaggaggccgagggg
cagttcgacctcttcggcggcatgggcgaggaagcgagcgacgagccgggcttcgggctc
gacgtcgagttctccgacgtcgaatgggacaagtcgtacctgctcgcgcaggaacgggag
atgctcggcctctacgtctccgaccacccgctcttcggcatcgagcacgtcctgtccgac
aagacggacgccgccatctcccagctcaccggcggggagcacgcggacggcgcggtcgtc
accatcggcggcatcatctccggcctccagcgcaagatgaccaagcagggcaacgcgtgg
gcgatcgccactgtggaggacctggccgggtccatcgagtgcatgttcttccccgcgacc
taccagctcgtctccacccagctcgtcgaggacaccgtcgtgttcgtcaagggccgcctc
gacaagcgcgaggacatcccgcgactggtcgccatggagctgatggtccccgacctgtcc
tcggccggcaccaacgcgccggtggtggtgacgattccgacggtcaaggtcacaccgccc
atggtcagccgcctcggtgagatcctcagccaccacaagggcaacaccgaggtccggatc
aagctccagggcccccgcaagaccacggtcctgcggctcgaccggcaccgcgtccagccc
gacccggccctcttcggcgacctcaaggtgctgctcggcccgtcctgtctggccggctga
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