Streptomyces pristinaespiralis: SPRI_5925
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Entry
SPRI_5925 CDS
T04073
Name
(GenBank) RNA helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
spri
Streptomyces pristinaespiralis
Brite
KEGG Orthology (KO) [BR:
spri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spri03019
]
SPRI_5925
Enzymes [BR:
spri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SPRI_5925
Messenger RNA biogenesis [BR:
spri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SPRI_5925
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
nSTAND_NTPase5
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ALC24231
UniProt:
A0A0M5J2F0
LinkDB
All DBs
Position
6874285..6877113
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AA seq
942 aa
AA seq
DB search
MTEDLSPAERYAAARVRAAEEATALAPFRAMYDFELDPFQIEACQALEAGKGVLVAAPTG
SGKTIVGEFAVHLALEQGRKCFYTTPIKALSNQKYSDLVKRYGAEKVGLLTGDNSVNSGA
PVVVMTTEVLRNMLYAGSQSLMGLGYVVMDEVHYLSDRFRGAVWEEVIIHLPESVTLVSL
SATVSNAEEFGDWLDTVRGDTEVIVSEHRPVPLWQHVLAGRRMYDLFEEETDHGGRGVAR
REVNPDLVRLARMENSRTYNPRDRRRGKMVREADRERERRQRSRIWTPARSEVIDRLDAE
GLLPAITFIFSRAGCEAAVQQCLYAGLRLNDEDARREVREIVEDRTASIPGEDLHVLGYY
EWLEGLERGIAAHHAGMLPTFKEVVEELFVRGLVKAVFATETLALGINMPARSVVLEKLV
KWNGEQHADITPGEYTQLTGRAGRRGIDVEGHAVVLWQRAMDPEALAGLAGTRTYPLRSS
FKPSYNMAVNLTQQFGRHRSRELLETSFAQFQADKSVVGISRQVQRNEEGLEGYREGMTC
HLGDFTEYARLRRDLKDRETELAKQGAAQRRAAAATSLEKLKPGDVIHVPTGKFAGLALV
LDPGLPAGRTNGHRGLEHHDGPRPLVLTSERQVKRLASIDFPVPVEALERMRIPKSFNPR
SPQSRRDLASALRTKAGHIVPERHGKRRSAAADDREISRLRAQLRAHPCHGCDEREDHAR
WAERYFRLQRDTRQLERRIEGRTNTIARTFDRIVALLTEMDYLRGDEVTEDGKRLARLYG
ELDLLASECLREGVWEGLNPAELAACVSALVYEARQSDDAVAPKVPAGKAKVALAEMVRI
WGRLDALEEEFRINQAEGVGQREPDLGFAWAAHQWASDKGLDEVLGEVGMPAGDFVRWCK
QVIDVLGQIAAAAPRENSTVSKNARKAVDALLRGVVAYSSVG
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaggacctctctcccgcagagcgctatgccgccgcccgcgtccgcgccgccgag
gaggccactgcgctggcccccttccgagcgatgtacgacttcgaactcgatcccttccag
atcgaggcatgccaggccctggaggcgggcaagggcgtgctcgtcgccgcgcccaccggc
tcgggcaagacgatcgtcggcgagttcgccgtccacctcgccctcgagcagggccgcaag
tgcttctacaccacgcccatcaaggcgctctccaaccagaagtacagcgacctggtcaag
cgttacggcgcggagaaggtcgggctgctgaccggcgacaacagcgtcaactccggtgct
ccggtggtcgtcatgaccaccgaggtgctgcgcaacatgctctacgcgggctcccagtcg
ctgatgggcctcggctacgtcgtcatggacgaggtgcactacctctccgaccgtttccgc
ggcgccgtctgggaggaagtcatcatccacctccccgagtcggtgaccctggtgtcactc
tcggcgaccgtgtcgaacgcggaggagttcggcgactggctcgacaccgtgcgcggcgac
accgaggtcatcgtctccgaacaccggcccgtgcccctgtggcagcacgtcctcgcgggg
cggcggatgtacgacctcttcgaggaggagaccgaccacggcggccgcggcgtcgcccgc
cgcgaggtcaaccccgatctcgtccggctggccaggatggagaacagccgcacctacaac
ccgcgtgaccggcgccgcgggaagatggtgcgcgaggcggaccgggagcgcgagcggcgc
cagcgcagccgcatctggacgcccgcccggtcggaggtcatcgaccggctcgacgcggag
ggactgctccccgccatcacgttcatcttcagccgggcgggctgcgaagccgccgtgcag
cagtgcctgtacgccggtctgcggctcaacgacgaggacgcgcgcagagaagtgcgcgag
atcgtcgaggaccgtaccgcctccatccccggcgaagaccttcatgtcctcggctactac
gagtggctggagggcctggagcggggtatcgccgcgcaccacgccggcatgctgcccacc
ttcaaggaagtcgtcgaggagctgttcgtacggggcctggtgaaggccgtgttcgccacg
gagacgctggcgctgggcatcaacatgcccgcccgttcagtggtgttggagaagctcgtc
aagtggaacggcgagcagcacgcggacatcacccccggcgagtacacccagttgaccggc
cgcgccggccgccgcggcatcgatgtcgagggccacgcggtggtcctgtggcagcgggcg
atggacccggaggcgctggcggggctcgccggcacccggacgtacccgctgcgctcaagc
ttcaagccgtcgtacaacatggccgtcaacctcacccagcagttcggccggcaccgctcg
cgggaactgctggagacgtccttcgcgcagttccaggcggacaagtccgtcgtcggcatc
tcccgccaggtgcagcgcaacgaggaaggcctcgagggctaccgggagggcatgacctgc
cacctgggcgacttcaccgagtacgcacggctgcgccgcgacctgaaggaccgtgagacc
gaactcgccaagcagggcgcagcgcagcgcagggcggccgccgcgacctcgctggagaag
ctcaagccgggcgacgtcatccatgtccccacgggcaagttcgccgggctggcactggtc
ctcgacccggggctgccggccggccgcaccaacggccaccggggcctggagcaccacgac
gggccgcggccgctggtcctcacctccgagcggcaggtgaagcggctggcgtcgatcgac
ttcccggtgccggtcgaggcgctggagcggatgcgcatccccaagtccttcaacccccgt
tccccgcagtcccgtcgggacctcgcctcggcgctgcgcaccaaggcggggcacatcgtg
cccgagcggcacggcaagcggcggtccgccgccgcggacgaccgggagatctcccggctg
cgtgcccagttgcgcgcccacccctgccacggctgcgacgaacgtgaggaccacgcccgc
tgggccgagcggtacttccgtctccagcgcgacacccggcagctggagcgccgtatcgag
ggccgtacgaacaccatcgcgcggaccttcgaccggatcgtggcgctgctgacggagatg
gactacctccgtggcgacgaggtcaccgaggacggcaagcgtctggcacgcctctacggc
gagctggacctgctggcgagcgaatgccttcgcgaaggcgtctgggagggcctgaacccg
gcggaactggccgcctgcgtctcggcgttggtgtacgaggcgcggcagtcggacgacgcg
gtcgcgcccaaggtcccggccgggaaggcgaaggtggccctcgccgagatggtccgcatc
tggggccggctggacgccctggaggaggagttcaggatcaaccaggcggagggcgtcggg
cagcgggagccggacctcggcttcgcctgggcggcccaccagtgggcgtccgacaagggg
ctcgacgaggtgctcggggaggtcggcatgccggccggcgacttcgtgcgctggtgcaag
caggtcatcgacgtgctcggccagatcgccgcggccgcgccccgggagaacagcaccgtg
tcgaagaacgcccgcaaggcggtcgacgcgctgctgcgtggtgtggtggcgtacagctcg
gtcggctga
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