Scylla paramamosain (green mud crab): 135088767
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Entry
135088767 CDS
T11531
Name
(RefSeq) ATP-dependent RNA helicase Ddx1-like
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
sprm Scylla paramamosain (green mud crab)
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sprm03041
]
135088767
03016 Transfer RNA biogenesis [BR:
sprm03016
]
135088767
Enzymes [BR:
sprm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135088767
Spliceosome [BR:
sprm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
135088767
Transfer RNA biogenesis [BR:
sprm03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
135088767
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
Motif
Other DBs
NCBI-GeneID:
135088767
NCBI-ProteinID:
XP_063839846
LinkDB
All DBs
Position
31:17645837..17659013
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AA seq
736 aa
AA seq
DB search
MAAFEEMGVMPEIAKAVEEMDWTLPTDVQNEAIPLILGGGDVLMAAETGSGKTGAFCLPI
LQIVWESLKDIQQGKTSKITKEVSPLWLMSFFDRDAGLAVTPDGLRCQSRDPKAWQGVRC
TKGVTGKGKYFFEAVVSDEGLCRLGWSTPQAALDLGTCKNGFGFGGTGKKSNCKQFDDYG
ECFGLNDTIGCYLDLDSMEMRYSKNGVDLGKAFTLRSEFKNAVFHPAVVLKNAEVTFNFG
QKDFKHPPKAGYVAVCDASKDCTVHGGIRAAGDKPQKIQNNAPQAVIIEPSRELAEQTLK
QVQLFRKHLENPLVRDLLVVGGIPVKDQIAALNKGVDIVCGTPGRLEELINTGQLSLQSC
KFFVLDEADGLLKQGHEKLINNIYNSIPKITSDGKRLQMVVCSATLHSFEVKRMAERLMH
FPTWVDLKGEDSVPETVHHVVVTVDPRTDNSWTSLRRHVQTDGVHAKDGVRPGNNTPETL
SEAVKMLKGELCVKAIDMHNMDKALIFCRTKLDCDNMERYFNQIGGGAHNRGNPYSCVCL
HGDRKPGERKANLQSFKDGNVKFLICTDVAARGIDVSGLPFIINVTLPDEKSNYVHRIGR
VGRAERMGLAISLVSAVPEKVWYHGEWCPSRGRNCYNTRLTTERGCCTWYNEPQYLADIE
EHLGVTIQQVDKDMKVPVDEFDGKVVYGEKKGRAGSDYQTHVEQLAPAVHELAKLEKETQ
NIYLKRQYGKVYPWTR
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggcggctttcgaagagatgggcgtcatgcccgaaatagccaaggcagttgaggagatg
gactggacgctgccaacggatgtgcagaacgaggctattcccctcatccttggtggtggt
gatgtgctgatggctgccgagacagggagtggcaagaccggtgccttctgtctgcccatc
ctgcagattgtgtgggagtcacttaaggacatccagcaagggaagacatccaagatcacc
aaggaagtgtctcccctgtggctgatgagcttctttgaccgtgacgctgggctggctgtg
acccctgacggcctgcgctgccagtcccgggaccccaaggcgtggcaaggggtccgctgc
accaagggcgtgacgggcaagggcaaatatttctttgaggcagtggtgtccgacgagggc
ctgtgcagattgggctggtcgacccctcaggctgctttggatcttggcacttgcaagaat
gggtttgggtttggtggcactggtaagaagtccaattgcaagcagtttgatgattatggt
gagtgttttggtctgaatgacaccattggctgctacctggacctggacagcatggagatg
aggtacagcaagaatggtgtggacttgggcaaggctttcaccctacgtagtgagttcaag
aatgctgtgtttcatcctgctgttgtgctcaagaatgcagaggtcaccttcaactttggg
cagaaagacttcaagcaccccccgaaagctggctacgtggctgtgtgtgatgccagcaag
gactgcaccgtgcatggtgggataagggctgcaggagacaagccacagaagatccagaac
aatgcccctcaggctgtcatcattgagccgtccagagagcttgccgagcagacactgaag
caggtgcagctgttccgtaagcacctggagaaccccctggtgcgggacctgctggtggtg
ggtggcatccctgtcaaggaccagatcgctgccctcaacaaaggagtggacattgtgtgt
ggcactcctggccgtctggaggagctcatcaacactggccagctctccctgcagtcttgt
aaattctttgtgttggatgaagctgatggattgctgaagcagggacacgagaagttgatc
aataacatctacaactccatccccaagatcacatcagatggcaagaggctacagatggtg
gtttgctccgccactctccattcctttgaagtgaagcgcatggcggagcggttgatgcat
ttccccacctgggttgatctgaagggggaggactcagtgcccgaaacagtccaccatgtt
gtagtgacggtggacccccgaacagacaacagctggacctccctgcgacgccacgtgcag
actgacggtgtgcatgccaaggatggtgtgcggcctggcaacaacacgccagagacgctg
agtgaggcggtcaagatgctgaagggagagctgtgtgtgaaggcaattgacatgcacaac
atggacaaggctctcattttctgccgcaccaagctagactgtgataacatggagcgctac
ttcaaccagataggtggtggcgcccacaatcgaggcaacccttattcctgtgtgtgcctg
catggtgaccgcaagccaggcgagcggaaggccaacctgcagtcattcaaggacggcaat
gtcaagttcctcatttgtaccgatgttgctgctcgaggaatagatgtatcagggctacct
ttcatcatcaacgtaactctgccagatgagaagagcaattacgttcaccgcattgggcgt
gtgggccgagctgagaggatggggctggccatctccctggtgtcagctgtccctgagaag
gtgtggtatcacggggagtggtgcccaagccgaggccgtaattgctacaacacgcgcctc
accactgaacgtggctgctgcacctggtataatgagccacagtacttggcggatattgag
gagcatcttggcgtgacgatccagcaagtagacaaggacatgaaggtgcctgtggacgag
tttgacggcaaggtggtgtacggagaaaagaaaggacgtgcaggctctgattaccagact
catgtggaacagctggcacctgctgttcacgagttggccaaactggagaaggagactcaa
aacatttatcttaagcgtcagtacggcaaagtctacccttggacacggtaa
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