Scylla paramamosain (green mud crab): 135089029
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Entry
135089029 CDS
T11531
Name
(RefSeq) zinc finger protein ubi-d4 A-like isoform X1
KO
K13196
zinc finger protein ubi-d4
Organism
sprm Scylla paramamosain (green mud crab)
Pathway
sprm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135089029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sprm03041
]
135089029
03036 Chromosome and associated proteins [BR:
sprm03036
]
135089029
Spliceosome [BR:
sprm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
135089029
Chromosome and associated proteins [BR:
sprm03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
135089029
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHDvar_NSD
zf-C2H2_7th_ZNF462
PHD_4
zf_RING_Vps8
zf-C2H2_4
PHD_2
TNP-like_RNaseH_C
Motif
Other DBs
NCBI-GeneID:
135089029
NCBI-ProteinID:
XP_063840259
LinkDB
All DBs
Position
32:complement(2397782..2423905)
Genome browser
AA seq
542 aa
AA seq
DB search
MADTLVQSNLEKISSFLQDVQYRSLMINSANYNVRLMRERKTRLPFLDSQTGIAQNPCKL
YMSARHRMPGTTEGQLYVYPSQRWCCRKRSYMALAHQHWLLKKAIKEPEGDEHTIVTVEN
PAAVTTEENNFAYEVKHLCLPQEQYYFDESAFLEEEDEEPDDDDDDTYSTRAVPTRKRKK
PPKLPKPVKVKTPSGRGRGRKKDTQPKVTAEGEEETPGKPYECQLCGARYKTRQGLSYHL
SHTHKGGRANSGGGRSRGGGNSNNNTPSAHPRADPASYQPQAFQSDALAGLAEFQDSYLG
YLSAGQDASPTGQGGSGTTSTASSRRSSGGGLVGAGVPVLGGNSSPVASRGGKVPTSTVW
SSLASVESAASLVTSTPAPVVTPTPEPQLRESSPAGLTPHDPEQQLGVAPVPAPPHPPKS
SGVEKGRAQPSPYCDFCLGDTSLNKKTGESEELVSCSDCGRSGHPTCLQFTAHMMISVRQ
YRWQCIECKCCTLCGTSENDDQLLFCDDCDRGYHLYCLRPPLQEPPEGEWSCDLCLQQFH
TK
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcagacacactagtgcagtccaatctggagaaaataagcagcttcctgcaagatgtg
cagtaccgctccctgatgatcaacagtgccaactacaatgttcggctcatgagggaacgc
aagacccgcctcccatttcttgattcacagacaggaatagcccaaaatccatgcaagctg
tacatgagtgcccggcaccgcatgccgggcaccaccgagggccagctctatgtgtacccg
tcccagcgctggtgctgtcggaaacggtcttacatggcgctcgcccaccagcactggctc
ttgaaaaaggccatcaaggagcctgagggggatgagcacaccatcgtgactgttgagaac
ccagcagctgtcaccactgaggagaacaactttgcttatgaggtgaagcacctctgctta
cctcaggagcagtactactttgacgagtcagcatttctggaggaggaggatgaagaacct
gatgatgatgatgatgacacatactccactcgtgctgtccccaccagaaagaggaaaaag
cccccaaagctgcccaagcctgttaaagtgaagactccaagtgggcgaggacgaggccgc
aagaaggacactcagcctaaggtgacagcagagggggaggaagagacaccagggaagccc
tacgagtgccagctgtgtggcgctcggtacaagacgaggcagggcttgtcctaccatctc
tcgcacacacacaaagggggcagggctaactccgggggcgggcgttcccgggggggcggc
aacagcaacaacaacactccaagtgcccatcccagggctgatccagccagctaccagccc
caggccttccagtctgatgccctggctggcctggcagaatttcaggacagttaccttggc
tacctgtcggccggtcaagacgcctcacccacgggccagggtgggtccggcactactagc
accgccagcagtagacggtccagtgggggcggcctagttggggcaggggtgcctgtgctg
gggggcaacagctctccggtggcctccaggggtggcaaggttcccacctccaccgtctgg
tccagtctggccagtgtggagtcagctgcctccctggtgacctccacccctgccccggtg
gtcaccccaacccctgagccacagctgagggagtcgagccctgctggtctgacccctcat
gacccagaacagcagcttggtgtggctccagtgccggccccgccacaccccccaaagtcc
agtggagtggaaaagggccgagctcagccgagtccttactgcgacttctgcctcggggac
acatcactcaacaagaaaactggggagtcggaggagctcgtatcttgctctgactgtggc
cgctcgggacacccaacctgcctccagttcaccgctcatatgatgatctcagtgaggcag
tacagatggcagtgcattgagtgtaaatgctgcaccctctgtggcacttcagagaatgat
gatcagcttctcttctgtgatgactgtgaccgaggctaccacctgtactgcctgcggcct
cccctgcaggagccgcctgagggtgagtggtcctgtgacctctgcctgcagcagttccac
accaagtga
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