Scylla paramamosain (green mud crab): 135089132
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Entry
135089132 CDS
T11531
Name
(RefSeq) fizzy-related protein homolog isoform X1
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
sprm Scylla paramamosain (green mud crab)
Pathway
sprm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135089132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sprm04121
]
135089132
Ubiquitin system [BR:
sprm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
135089132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_RIG_2nd
Beta-prop_HPS5
Tricorn_2nd
WDR90_beta-prop_4th
Beta-prop_RIG_1st
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR41
ELYS-bb
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_VPS8
Ge1_WD40
DUF5808
Motif
Other DBs
NCBI-GeneID:
135089132
NCBI-ProteinID:
XP_063840467
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All DBs
Position
32:5833398..5842650
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AA seq
500 aa
AA seq
DB search
MYTSNPSPCFVSRSVMDREYERRLLRQQNGPVSSPASPLSPRRQLAHISVQSPSKDRTGD
RFIPTRVGANWDVNFALIQENNKANSEVRKGREGGEGKDGVAYTTLLRNELLGTSIEDLR
DTPDERRALSPVQSPNLYHFSPRKNQQREDTLSPYSLSPVSAKSQKLLRSPRKAARKISK
IPFKVLDAPELQDDFYLNLVDWSSQNVLSVGLGHCVYLWSAYTSQVTRLCDLSPDGDTVT
SVSWSERGNQVAVGTHKGLVQVWDVASSKRVCILNGHTARVGALAWNGDVLSSGSRDRLI
LQRDVRTPCIIPDRRLAGHRQEVCGLKWSPDSQYLASGGNDNKLFVWNLHSLTAVQTYTE
HNAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCIDTGSQVCNLAWSKHASE
LVSTHGYSQNQILVWRYPLLAQVAKLTGHTYRVLYLAMSPDGEAIVTGAGDETLRFWNVF
SKARSQKESKSALNLFTSLR
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgtacacctctaacccatcgccttgttttgtgtcacgttcagttatggaccgtgagtat
gagagacgtcttctcaggcaacaaaatggacctgtctcatcaccagcatcaccattgtca
ccccgccgccagctggcccacatttcagtgcaatccccaagcaaagaccgaactggggac
agattcatccccacacgagtaggtgccaactgggatgttaactttgctctgattcaggag
aacaacaaagccaacagtgaggtgcggaaggggcgtgagggaggagagggcaaggatgga
gtggcctacacaaccctcctgaggaatgaactcttgggcacaagcattgaggaccttcga
gacacccctgatgaaagaagagcactgtcccctgttcagagtcccaatctgtaccatttt
tctcctcgcaaaaatcagcagcgggaggacacactgtcgccctattccctttcccctgtc
agtgccaagagccaaaagctgctgagatccccaaggaaggcagctcgcaaaatatcaaag
ataccatttaaggtacttgatgctccagagctacaggatgacttctacctcaacctagtg
gactggagctctcaaaatgttctctcagtgggattaggtcactgtgtgtacttgtggtca
gcatacacctcacaggtcacccgactgtgtgatctctcccccgatggtgacacagtgacc
tcagtgtcttggtcagaaaggggcaatcaggtggcagtaggaacacacaaggggctggtg
caggtgtgggacgtagccagcagcaagcgagtgtgcattctgaacggccacacagctcgt
gttggagcgttggcgtggaatggagatgtcctttcctcaggctcccgggacagacttatc
cttcagcgtgatgtgaggactccctgcatcatccctgaccgccggctagcaggacaccgg
caggaggtgtgtgggctaaagtggtcaccagacagccagtacctggcctcgggtggtaat
gacaacaagttatttgtctggaaccttcactctctcacagctgttcagacctacactgag
cacaatgcagcagtaaaagctattgcctggtcaccacaccaccatgggctgctggctagt
ggaggtggaacagctgatcgctgcatacgtttctggaacaccttaacagggcagccaatg
cagtgcattgacactggatctcaagtgtgcaacctggcatggtccaaacatgcatctgaa
ctggtatccacccatgggtatagtcaaaaccagatcttggtgtggcgttacccactcctt
gcccaggtggccaaacttactggccacacgtaccgggtgctgtatctagccatgtcaccg
gatggggaggccatagttactggtgctggggatgagactctgcgcttctggaatgtcttc
agcaaagcccgctctcagaaggagtccaagtctgcactcaacctcttcacatctctgcga
taa
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